Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_J09
         (788 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    26   0.46 
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    23   2.4  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           23   4.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   4.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.7  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   5.7  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    22   7.5  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    22   7.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   9.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   9.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   9.9  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +1

Query: 703 HVPLTXRSHRGEHSTGIVVXTVGAHGG 783
           H       HRG H T IVV  V A  G
Sbjct: 203 HAAFISMRHRGAHITDIVVLVVAADDG 229


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -2

Query: 238 NNTACSANCSAGGEECGLGS--GCPSEQTHF 152
           N++AC+ANC + G+  G     GC   +T F
Sbjct: 56  NDSACAANCLSLGKAGGHCEKVGCICRKTSF 86


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 238 NNTACSANCSAGGEECG 188
           N++AC+ANC + G+  G
Sbjct: 31  NDSACAANCHSLGKAGG 47


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = -1

Query: 668 YKNIDDVCVPQCLDCRNGECVAPNDCLCHD 579
           Y+  D   V QC+ CR G         C D
Sbjct: 615 YQIRDHKDVTQCISCRQGTVPDETHSACRD 644


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 499 KCTCDDGYRLSPEDP 455
           +C CD GY  + +DP
Sbjct: 295 ECRCDPGYFRAEKDP 309


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 238 NNTACSANCSAGGEECG 188
           N++AC+ANC + G+  G
Sbjct: 56  NDSACAANCLSLGKAGG 72


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 367 RNDTNSNVCYKKCDGACE 314
           R    SN  + +CDG C+
Sbjct: 34  RGKCPSNEIFSRCDGRCQ 51


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 367 RNDTNSNVCYKKCDGACE 314
           R    SN  + +CDG C+
Sbjct: 34  RGKCPSNEIFSRCDGRCQ 51


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -2

Query: 325 GACENGRCSLDGACECDSGYILSNGTCIRNNTACSA 218
           G+C  G       C+   G + SN   IR  T C A
Sbjct: 532 GSCAPGAPLDSKLCQQCVGNLASNNDRIRQVTKCKA 567


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -2

Query: 325 GACENGRCSLDGACECDSGYILSNGTCIRNNTACSA 218
           G+C  G       C+   G + SN   IR  T C A
Sbjct: 532 GSCAPGAPLDSKLCQQCVGNLASNNDRIRQVTKCKA 567


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -2

Query: 325 GACENGRCSLDGACECDSGYILSNGTCIRNNTACSA 218
           G+C  G       C+   G + SN   IR  T C A
Sbjct: 532 GSCAPGAPLDSKLCQQCVGNLASNNDRIRQVTKCKA 567


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,267
Number of Sequences: 438
Number of extensions: 4539
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)