Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_I22
         (811 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    25   0.83 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.3  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   4.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   4.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.8  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   7.7  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   7.7  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   7.7  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 25.0 bits (52), Expect = 0.83
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 312 SLISNLSNTCDLTPLPEWSCERSAWWGACGRVL 214
           SL +N   +  LTP P W+  ++   GACG  +
Sbjct: 98  SLDTNRGGSPKLTPYPNWAQNKA---GACGSAI 127


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 620 CPVRCRARTVARWKLAWQCS 561
           C VRC A +  RW   W+ S
Sbjct: 19  CSVRCSAASGLRWFEIWRDS 38


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 328 WRAAAACTRDTRGALPASPSRLDT 399
           W    ACT  T G +  +PS  DT
Sbjct: 487 WVFTLACTAGTLGIIFQAPSLYDT 510


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 543 SPGKTSGTLPRELPPRHGPGSAPHWTDPS 629
           +P + S   P + PP  GP  AP   +PS
Sbjct: 33  APQRGSPPNPSQGPPPGGPPGAPPSQNPS 61


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -1

Query: 625 GSVQCGAEPGPWRGGSSRGNVPDVFPGDAPRH 530
           G  +C  +PG +R       +P   P  AP++
Sbjct: 292 GFTECRCDPGYFRAEKDPKKMPCTQPPSAPQN 323


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 727 RSKFGXRMHNSDEMDFVXDKK 665
           R  FG  +H+ +E++   DKK
Sbjct: 184 RINFGSWVHSGEEVNIFLDKK 204


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 657 CIFFLSXTKSISSLLCILXPNFERSK 734
           C+FFL+   S + +LC   P+   +K
Sbjct: 434 CVFFLTTIVSTTVILCGSPPSANIAK 459


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 468 LAARHWTTTSCGFSVH 421
           LAAR  T++SC +  H
Sbjct: 331 LAAREITSSSCSYMAH 346


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,083
Number of Sequences: 438
Number of extensions: 2515
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)