Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_I11
         (840 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327...   217   9e-57
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342...   210   1e-54
11_01_0710 - 5830475-5830595,5831498-5834124                           31   1.5  
07_01_0761 + 5849466-5850677                                           31   1.5  
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663...    30   2.6  

>11_01_0427 +
           3274817-3274901,3275587-3275697,3275979-3276283,
           3276406-3276815,3276942-3277200
          Length = 389

 Score =  217 bits (530), Expect = 9e-57
 Identities = 101/153 (66%), Positives = 120/153 (78%)
 Frame = -1

Query: 570 PVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIK 391
           P +  + LRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG     K G+   
Sbjct: 242 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQE-S 295

Query: 390 NNASTEYDLSEKSITPMGGFPHYGEINNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAAL 211
           + A TE+D +EK ITPMGGFPHYG +  D++MIKGCC+GPKKR++TLR+SL   T R AL
Sbjct: 296 HAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355

Query: 210 EKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 112
           E+I LKFIDTSSKFGHGRFQT  +K  F G LK
Sbjct: 356 EEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388



 Score = 89.0 bits (211), Expect = 4e-18
 Identities = 39/66 (59%), Positives = 50/66 (75%)
 Frame = -3

Query: 748 EIQLSGGPXEDKMKWXREHLEKPIPVDSVFAQDEMIDCIGVTKXKGYKGVTSRWHTKKLP 569
           EIQ++GG   DK+ +  +  EK IPVD+VF +DEMID IGVTK KGY+GV +RW   +LP
Sbjct: 183 EIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242

Query: 568 RKTHQG 551
           RKTH+G
Sbjct: 243 RKTHRG 248


>12_01_0435 +
           3428552-3428636,3429242-3429352,3429434-3429738,
           3429821-3430230,3430323-3430556,3430934-3431378,
           3432300-3432390,3433292-3433518,3433786-3433861,
           3434009-3434134,3434221-3434384
          Length = 757

 Score =  210 bits (512), Expect = 1e-54
 Identities = 97/145 (66%), Positives = 116/145 (80%)
 Frame = -1

Query: 570 PVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIK 391
           P +  + LRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG     K G+   
Sbjct: 242 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQE-S 295

Query: 390 NNASTEYDLSEKSITPMGGFPHYGEINNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAAL 211
           + A TE+D +EK ITPMGGFPHYG +  D++MIKGCC+GPKKR++TLR+SL   T R AL
Sbjct: 296 HAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355

Query: 210 EKINLKFIDTSSKFGHGRFQTPADK 136
           E+I LKFIDTSSKFGHGRFQT  +K
Sbjct: 356 EEIKLKFIDTSSKFGHGRFQTTDEK 380



 Score = 89.0 bits (211), Expect = 4e-18
 Identities = 39/66 (59%), Positives = 50/66 (75%)
 Frame = -3

Query: 748 EIQLSGGPXEDKMKWXREHLEKPIPVDSVFAQDEMIDCIGVTKXKGYKGVTSRWHTKKLP 569
           EIQ++GG   DK+ +  +  EK IPVD+VF +DEMID IGVTK KGY+GV +RW   +LP
Sbjct: 183 EIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242

Query: 568 RKTHQG 551
           RKTH+G
Sbjct: 243 RKTHRG 248


>11_01_0710 - 5830475-5830595,5831498-5834124
          Length = 915

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 636 QSIISSWANTESTGIGFSRCSLXHFILSSXGPPLS 740
           +S+ISSW  +  TG   S CS+ + ++     PLS
Sbjct: 650 ESVISSWGGSVHTGTSSSSCSVTNLVVKFCTLPLS 684


>07_01_0761 + 5849466-5850677
          Length = 403

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
 Frame = -1

Query: 603 VSLLVGTQRSYPVRHTKXLRKVACI--GAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRI 430
           V+LLVG  R   V        V+ +  G  HP   SFT+ RA      H      K+ RI
Sbjct: 129 VALLVGNDRRLRVLDAAASAAVSLVPDGEHHPINCSFTLGRAASSSGEH------KVLRI 182

Query: 429 GQGIH 415
           G  +H
Sbjct: 183 GTVVH 187


>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
            30366541-30366849,30367544-30370567,30370640-30372290,
            30372373-30373463,30373544-30373646,30373737-30374439,
            30374654-30375783,30375913-30376027,30376504-30376695,
            30377443-30377616,30378438-30378494,30378581-30378716,
            30378842-30378927,30379023-30379092,30379993-30380021,
            30380444-30380456,30380762-30381006
          Length = 3582

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 369  DLSEKSITPMGGFPHYGEINNDFVMIKGCCMG 274
            D +  + +P+GG P YG ++ D  +   C +G
Sbjct: 1371 DPTSAAASPIGGIPRYGRLSGDVYVCNQCTIG 1402


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,258,472
Number of Sequences: 37544
Number of extensions: 476969
Number of successful extensions: 1086
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)