Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_I10
         (787 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014212-1|AAH14212.1|  344|Homo sapiens FBS1 protein protein.         36   0.22 
AK022551-1|BAB14094.1|  372|Homo sapiens protein ( Homo sapiens ...    36   0.22 
AK021680-1|BAB13872.1|  399|Homo sapiens protein ( Homo sapiens ...    36   0.22 
BC053863-1|AAH53863.1|  709|Homo sapiens YTH domain containing 1...    31   6.2  
BC041119-1|AAH41119.1|  727|Homo sapiens YTH domain containing 1...    31   6.2  
AC074378-1|AAY41024.1|  658|Homo sapiens unknown protein.              31   6.2  
AB075846-1|BAB85552.1|  480|Homo sapiens KIAA1966 protein protein.     31   6.2  
AK056430-1|BAB71181.1|  658|Homo sapiens protein ( Homo sapiens ...    30   8.2  

>BC014212-1|AAH14212.1|  344|Homo sapiens FBS1 protein protein.
          Length = 344

 Score = 35.5 bits (78), Expect = 0.22
 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
 Frame = +3

Query: 423 FPQREWXGXPPPFXGXPPXWGA--RKKKNFPFWXRP 524
           F Q+E  G PP F   P  WG   R    FP W RP
Sbjct: 117 FAQKESPGAPPAFASPPDPWGRLHRSPLTFPAWVRP 152


>AK022551-1|BAB14094.1|  372|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12489 fis, clone NT2RM2001588. ).
          Length = 372

 Score = 35.5 bits (78), Expect = 0.22
 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
 Frame = +3

Query: 423 FPQREWXGXPPPFXGXPPXWGA--RKKKNFPFWXRP 524
           F Q+E  G PP F   P  WG   R    FP W RP
Sbjct: 117 FAQKESPGAPPAFASPPDPWGRLHRSPLTFPAWVRP 152


>AK021680-1|BAB13872.1|  399|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11618 fis, clone HEMBA1004048. ).
          Length = 399

 Score = 35.5 bits (78), Expect = 0.22
 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
 Frame = +3

Query: 423 FPQREWXGXPPPFXGXPPXWGA--RKKKNFPFWXRP 524
           F Q+E  G PP F   P  WG   R    FP W RP
Sbjct: 117 FAQKESPGAPPAFASPPDPWGRLHRSPLTFPAWVRP 152


>BC053863-1|AAH53863.1|  709|Homo sapiens YTH domain containing 1
           protein.
          Length = 709

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 444 GXPPPFXGXPPXWGARKKKNFPFWXRPKPP 533
           G PPP+ G PP  G  +  + P++    PP
Sbjct: 582 GPPPPWQGMPPYPGMEQPPHHPYYQHHAPP 611


>BC041119-1|AAH41119.1|  727|Homo sapiens YTH domain containing 1
           protein.
          Length = 727

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 444 GXPPPFXGXPPXWGARKKKNFPFWXRPKPP 533
           G PPP+ G PP  G  +  + P++    PP
Sbjct: 600 GPPPPWQGMPPYPGMEQPPHHPYYQHHAPP 629


>AC074378-1|AAY41024.1|  658|Homo sapiens unknown protein.
          Length = 658

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 444 GXPPPFXGXPPXWGARKKKNFPFWXRPKPP 533
           G PPP+ G PP  G  +  + P++    PP
Sbjct: 531 GPPPPWQGMPPYPGMEQPPHHPYYQHHAPP 560


>AB075846-1|BAB85552.1|  480|Homo sapiens KIAA1966 protein protein.
          Length = 480

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 444 GXPPPFXGXPPXWGARKKKNFPFWXRPKPP 533
           G PPP+ G PP  G  +  + P++    PP
Sbjct: 353 GPPPPWQGMPPYPGMEQPPHHPYYQHHAPP 382


>AK056430-1|BAB71181.1|  658|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31868 fis, clone NT2RP7001962, highly similar to
           Rattus norvegicus YT521 mRNA for RNA splicing-related
           protein. ).
          Length = 658

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 444 GXPPPFXGXPPXWGARKKKNFPFWXRPKPP 533
           G PPP+ G PP  G  +    P++    PP
Sbjct: 531 GPPPPWQGMPPYPGMEQPPQHPYYQHHAPP 560


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,235,270
Number of Sequences: 237096
Number of extensions: 989064
Number of successful extensions: 887
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)