Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_I08
         (784 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084158-3|AAL00872.1|  313|Caenorhabditis elegans Hypothetical ...    29   2.8  
Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical pr...    29   5.0  

>AC084158-3|AAL00872.1|  313|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.18b protein.
          Length = 313

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 611 KQRRYERLAATSQLSLVVPFLAPLA-KNSLY*RIDRPCFRS 730
           K+     L A+  LSL VPFL PL  K SL+ R + P F+S
Sbjct: 245 KESATSELPASKYLSLSVPFLHPLLFKLSLFRRPNFPHFKS 285


>Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical
           protein T02E9.3 protein.
          Length = 763

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = -3

Query: 428 FGHLVHALGRAAGGAKLPSAGLYLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRV 249
           FG L H  G       LP   +    S+  + ++++G    +   R+SGGSK+   +   
Sbjct: 212 FGQLTHRGGERERRHSLPRVIIEEVRSRRGSRMSQTGSQSGSPTRRQSGGSKERSPSQPD 271

Query: 248 SH--SKRETRRRSP 213
            H  +K + R RSP
Sbjct: 272 IHIVAKPQQRWRSP 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,248,699
Number of Sequences: 27780
Number of extensions: 388034
Number of successful extensions: 1139
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)