Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_I03
         (805 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129           31   1.4  
09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672...    30   1.9  
12_02_1142 + 26432634-26432786,26433222-26433314,26433465-264338...    30   2.5  
11_01_0432 + 3313060-3313107,3313610-3313753,3314510-3314662,331...    29   4.3  
01_05_0045 + 17535929-17536249,17536255-17536520,17537169-175377...    28   7.6  
06_03_0049 + 15961706-15962017,15962952-15963851,15964769-159649...    28   10.0 
02_03_0049 + 14421408-14421942,14421988-14422842,14423847-144241...    28   10.0 

>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
          Length = 114

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +1

Query: 265 ENGELEVPKSTVSGSGGSEMTCFGRRRLLSILSAGSGM*LPAA 393
           +N ++E+  S VSG   +E+   GR +  S+ S G G+ + AA
Sbjct: 35  DNAKMELLLSQVSGKDITELIACGREKFASVPSGGGGVAVAAA 77


>09_06_0351 +
           22466160-22466217,22466514-22467052,22467186-22467293,
           22467391-22467546,22467916-22468131,22468639-22468776,
           22468880-22468981,22469089-22469146,22469346-22469408,
           22469543-22469640
          Length = 511

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -3

Query: 467 ISKYLQSASMRHFDKAARHENPLIVAAGNYIPDPADRMESSRRRPK-HVISDP 312
           +S Y +S SM  F  +AR   P++ ++ NY+          RRR +  + SDP
Sbjct: 53  VSNYSRSTSMERFQLSARFHQPVVDSSTNYLTRWFYNANLKRRRIECFLTSDP 105


>12_02_1142 +
           26432634-26432786,26433222-26433314,26433465-26433821,
           26433883-26434188,26434251-26434259
          Length = 305

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 208 LCLRVNLLVEPFVASDGFDENGELEVPKSTVSGSGGSEMTC 330
           +CL+  ++V      DG + NG+    K  V+G G + +TC
Sbjct: 255 VCLQETMMVTVLAQVDGTEYNGQTMHFKPVVNGEGEARITC 295


>11_01_0432 +
           3313060-3313107,3313610-3313753,3314510-3314662,
           3315283-3315792,3315888-3317423,3317505-3317573,
           3317742-3317807,3318517-3318640,3319464-3319690
          Length = 958

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = -3

Query: 251 LATKGSTSKLTLRHSPLSFSPDLLSGSRFRSGGRFCEARLLLGFVLATSSGLSPVSS 81
           L TKG    +T+ H P+ FSP         S G   E+ L      + S GL P+S+
Sbjct: 203 LETKGKRLSVTVTHFPMIFSPISSRTFVLPSEGTMAESCLSNHHEDSLSPGLPPIST 259


>01_05_0045 +
           17535929-17536249,17536255-17536520,17537169-17537707,
           17537779-17538386
          Length = 577

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = +2

Query: 407 SRVVPLYRSGAWTPTADTY*WTLSPGRHGGRHS*RTTGLRRLSCKHGIE 553
           S  V +Y +G W PTAD   WT +P    G  S  +    R    H I+
Sbjct: 526 STPVQMYEAG-WEPTADAPGWTQAPRHSIGVSSQASASEDRWRAPHDIQ 573


>06_03_0049 +
           15961706-15962017,15962952-15963851,15964769-15964913,
           15964969-15965705
          Length = 697

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 407 SRVVPLYRSGAWTPTADTY*WTLSPGRH 490
           S +V +Y +G W PT D   WT +P RH
Sbjct: 569 STLVQMYEAG-WAPTGDATGWTQAP-RH 594


>02_03_0049 +
           14421408-14421942,14421988-14422842,14423847-14424151,
           14424469-14424984
          Length = 736

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +2

Query: 416 VPLYRSGAWTPTADTY*WTLSPGRHGGRHS*RTTGLRRLSCKHGI 550
           V +Y +G W PT D   WT +P    G  +  +    R    HGI
Sbjct: 596 VQMYEAG-WAPTGDARGWTQAPRHSIGVSTWASASEDRWHAPHGI 639


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,945,530
Number of Sequences: 37544
Number of extensions: 460313
Number of successful extensions: 1159
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)