Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_H18
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0513 - 22864657-22867899                                         32   0.52 
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060     31   0.91 
06_01_0893 - 6834350-6834464,6835042-6835218,6835301-6835350,683...    30   2.1  
02_02_0052 - 6389387-6389491,6389492-6389586,6390077-6390221           29   4.9  
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892...    26   7.2  
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703...    24   7.2  
11_06_0369 - 22760383-22760440,22761410-22761497,22761582-227616...    28   8.5  
09_02_0468 - 9608922-9610061                                           28   8.5  
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341...    28   8.5  

>01_05_0513 - 22864657-22867899
          Length = 1080

 Score = 32.3 bits (70), Expect = 0.52
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 640 PPPXXXXPXGGGGGXXPPPXXP 575
           PPP    P GGGG   PPP  P
Sbjct: 165 PPPEDRPPEGGGGDNAPPPEVP 186


>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
          Length = 794

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +1

Query: 598 PPPPPPXXFXXGGGG 642
           PPPPPP  F  GGGG
Sbjct: 11  PPPPPPPPFGRGGGG 25


>06_01_0893 -
           6834350-6834464,6835042-6835218,6835301-6835350,
           6836348-6836416,6836495-6836593,6836681-6836759,
           6837604-6837704,6838645-6838713,6839548-6839588,
           6839793-6841159,6841472-6841575,6841914-6842351,
           6843040-6843567
          Length = 1078

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = -3

Query: 641 PPPPXXKXXGGGGGG 597
           PPPP  K  GGGGGG
Sbjct: 23  PPPPVSKKGGGGGGG 37


>02_02_0052 - 6389387-6389491,6389492-6389586,6390077-6390221
          Length = 114

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 599 PPPPPXGXXXXGGGXXXXFFFFF 667
           PPPPP       GG    FFFF+
Sbjct: 35  PPPPPPPTVLVDGGLRAEFFFFY 57



 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 601 PPPPPXXFXXGGGGXXXXFFFFF 669
           PPPPP       GG    FFFF+
Sbjct: 35  PPPPPPPTVLVDGGLRAEFFFFY 57


>01_06_0565 +
           30287253-30287502,30287522-30289010,30289133-30289277,
           30289679-30289729
          Length = 644

 Score = 26.2 bits (55), Expect(2) = 7.2
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -1

Query: 640 PPPXXXXPXGGGGGXXPP 587
           PP     P GGGGG  PP
Sbjct: 89  PPCAPTPPQGGGGGYNPP 106



 Score = 20.6 bits (41), Expect(2) = 7.2
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 613 GGGGGXXPPP 584
           GGGGG  P P
Sbjct: 118 GGGGGYTPTP 127


>01_01_0892 +
           7037384-7037795,7038447-7038962,7039507-7039593,
           7039698-7039768,7040148-7040224,7040380-7040527,
           7040973-7041134,7041374-7041694
          Length = 597

 Score = 23.8 bits (49), Expect(2) = 7.2
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 586 GXXXPPPPPPXXF 624
           G   PPPPPP  F
Sbjct: 124 GHPPPPPPPPPPF 136



 Score = 23.0 bits (47), Expect(2) = 7.2
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +1

Query: 598 PPPPPPXXFXXGGGG 642
           PPPP P     GG G
Sbjct: 171 PPPPAPLNVHSGGSG 185


>11_06_0369 -
           22760383-22760440,22761410-22761497,22761582-22761649,
           22761742-22761858,22761964-22762084,22762172-22762247,
           22762336-22762435,22762524-22762615,22763514-22763664,
           22764698-22764792,22764900-22765193
          Length = 419

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +1

Query: 598 PPPPPPXXFXXGGGG 642
           PPPPPP     GGGG
Sbjct: 52  PPPPPPLMAALGGGG 66


>09_02_0468 - 9608922-9610061
          Length = 379

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +1

Query: 598 PPPPPPXXFXXGGGG 642
           PPPPPP     GGGG
Sbjct: 347 PPPPPPATTSNGGGG 361


>06_02_0257 -
           13533689-13533714,13533799-13533925,13534013-13534121,
           13534193-13534272,13534758-13534979,13536070-13536318,
           13537032-13537484,13539834-13540556
          Length = 662

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +1

Query: 598 PPPPPPXXFXXGGGG 642
           PPPPPP     GGGG
Sbjct: 66  PPPPPPSSAAAGGGG 80


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,145,480
Number of Sequences: 37544
Number of extensions: 286483
Number of successful extensions: 4275
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3644
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)