Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_H18
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 31 0.81
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 31 1.4
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 31 1.4
U41991-7|AAA83347.1| 255|Caenorhabditis elegans Hypothetical pr... 30 2.5
AC006633-3|AAK68375.1| 227|Caenorhabditis elegans Hypothetical ... 30 2.5
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 5.7
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 7.6
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 28 7.6
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 28 7.6
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 28 7.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 7.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 7.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 7.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 7.6
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 23 8.8
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 31.5 bits (68), Expect = 0.81
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 640 PPPXXXXPXGGGGGXXPPPXXP 575
PPP P GGG G PPP P
Sbjct: 35 PPPACGNPCGGGFGPPPPPFGP 56
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 576 GXXGGGXXPPPPPXGFXXXGG 638
G GGG PPPPP G GG
Sbjct: 672 GPPGGGQGPPPPPQGQQYYGG 692
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 576 GXXGGGXXPPPPPXGFXXXGG 638
G GGG PPPPP G GG
Sbjct: 672 GPPGGGQGPPPPPQGQQYYGG 692
>U41991-7|AAA83347.1| 255|Caenorhabditis elegans Hypothetical
protein C42D4.3 protein.
Length = 255
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 576 GXXGGGXXPPPPPXGFXXXGGG 641
G GGG PPPPP GGG
Sbjct: 29 GICGGGCPPPPPPMCSGGCGGG 50
>AC006633-3|AAK68375.1| 227|Caenorhabditis elegans Hypothetical
protein F35B3.4 protein.
Length = 227
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 576 GXXGGGXXPPPPPXGFXXXGGG 641
G GGG PPPPP GGG
Sbjct: 24 GICGGGCAPPPPPVCSGGCGGG 45
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 641 PPPPXXKXXGGGGGGXXXP 585
PPPP GGGGGG P
Sbjct: 32 PPPPPACGCGGGGGGYAAP 50
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 640 PPPXXXXPXGGGGGXXPPPXXP 575
PPP P GGG PPP P
Sbjct: 39 PPPPPPPPCGGGYEAPPPPPPP 60
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 576 GXXGGGXXPPPPPXGFXXXGG 638
G G G PPPPP G GG
Sbjct: 326 GPPGMGGMPPPPPPGMRYPGG 346
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 585 GGGXXPPPPPXGFXXXGGG 641
GGG PPP P G GGG
Sbjct: 45 GGGCAPPPAPCGGGCGGGG 63
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 585 GGGXXPPPPPXGFXXXGGG 641
GGG PPP P G GGG
Sbjct: 69 GGGCAPPPAPCGGGCGGGG 87
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 585 GGGXXPPPPPXGFXXXGGG 641
GGG PPP P G GGG
Sbjct: 45 GGGCAPPPAPCGGGCGGGG 63
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 585 GGGXXPPPPPXGFXXXGGG 641
GGG PPP P G GGG
Sbjct: 69 GGGCAPPPAPCGGGCGGGG 87
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 641 PPPPXXKXXGGGGGG 597
PPPP GGGGGG
Sbjct: 281 PPPPSGSAMGGGGGG 295
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 598 PPPPPPXXFXXGGGG 642
PPPPPP GGGG
Sbjct: 31 PPPPPPSPCGCGGGG 45
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 641 PPPPXXKXXGGGGGG 597
PPPP GGGGGG
Sbjct: 175 PPPPSGSAMGGGGGG 189
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 640 PPPXXXXPXGGGGGXXPPPXXP 575
PPP P GG G PPP P
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 640 PPPXXXXPXGGGGGXXPPPXXP 575
PPP P GG G PPP P
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPP 790
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 576 GXXGGGXXPPPPPXGFXXXGG 638
G G G PPPPP G GG
Sbjct: 336 GPPGMGGMPPPPPPGMRYPGG 356
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 640 PPPXXXXPXGGGGGXXPPPXXP 575
PPP P GG G PPP P
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPPP 373
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 23.4 bits (48), Expect(2) = 8.8
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 613 GGGGGXXPPPXXP 575
GGG G PPP P
Sbjct: 205 GGGSGRFPPPPPP 217
Score = 23.0 bits (47), Expect(2) = 8.8
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -1
Query: 667 KKKKKXXXXPPPXXXXPXGGGGG 599
++ ++ PP P GGGGG
Sbjct: 172 ERDRRNRGLPPSNDFGPGGGGGG 194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,238,293
Number of Sequences: 27780
Number of extensions: 139666
Number of successful extensions: 1714
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1314
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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