Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_H01
(802 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1155 - 24756414-24756836 30 1.9
08_01_0188 - 1575000-1575062,1575192-1575263,1575371-1575466,157... 29 4.3
12_02_0044 - 12807372-12807555,12807782-12807840,12807943-128080... 29 5.7
01_05_0269 + 20258338-20258536,20258570-20258727,20258777-202588... 29 5.7
01_01_1055 + 8342761-8342822,8343374-8343791,8343867-8344096,834... 29 5.7
12_02_0792 - 23191120-23191313,23191419-23191775,23192027-231921... 28 7.5
06_03_0163 - 17380601-17380710,17380796-17380856,17381076-173811... 28 7.5
03_06_0464 + 34126930-34127065,34127149-34127333,34127444-341276... 28 7.5
03_02_0630 + 9964593-9964738,9965548-9965603,9965895-9966745,996... 28 7.5
02_05_0974 - 33218817-33219634,33220733-33221012 28 7.5
11_06_0647 + 25870470-25870744,25870765-25871533 28 9.9
08_01_0560 - 4954479-4954746,4955106-4955167,4955208-4955284,495... 28 9.9
08_01_0352 + 3102552-3105243,3105684-3105748,3105824-3106492 28 9.9
06_03_0046 - 15852653-15854560 28 9.9
02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580 28 9.9
01_06_0482 - 29672720-29673854,29673941-29676267 28 9.9
>08_02_1155 - 24756414-24756836
Length = 140
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -2
Query: 162 WHPGARGRSHSSRLTRRPRTR 100
WHP AR R H L RRPR R
Sbjct: 115 WHPHARRRQHLWPLHRRPRQR 135
>08_01_0188 -
1575000-1575062,1575192-1575263,1575371-1575466,
1575856-1575981,1576627-1576684,1577364-1577419,
1577881-1577958,1578051-1578155,1578242-1578347,
1578435-1578556
Length = 293
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 67 SPLDSSIFVPIPRPGSPRQARAVTSSSRPR 156
SPL F P+PR P+ R S++R R
Sbjct: 21 SPLSRRAFFPLPRRAGPKSLRVFASAARRR 50
>12_02_0044 -
12807372-12807555,12807782-12807840,12807943-12808072,
12808160-12808224,12808318-12808506,12808574-12809119,
12809258-12809497,12809598-12810032
Length = 615
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 490 KEPADDLDNAKQSKPWYPRFEECLKTDAAW 401
K+P D KQ KP+Y R +E LKT +A+
Sbjct: 500 KKPVIIYDYPKQLKPFYARLKEDLKTVSAF 529
>01_05_0269 +
20258338-20258536,20258570-20258727,20258777-20258899,
20259176-20259310,20259380-20259479,20259572-20259945,
20259994-20260143
Length = 412
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -1
Query: 586 RRQVPVERPEKDKENRVRRKIAVPDGD-WEEKDKEPADDLDNAKQSKPWYPRFEECLKTD 410
++ P E PE + RR+ DGD EE++ ++D D ++P+ E + +D
Sbjct: 214 KQSFPPEDPEPGYKKDFRRRKEDDDGDNQEEEEFMESEDEDGKVDIPDYFPKLSEDVSSD 273
>01_01_1055 +
8342761-8342822,8343374-8343791,8343867-8344096,
8344136-8344324,8344458-8344555,8344588-8344742
Length = 383
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 70 PLDSSIFVPIPRPGSPRQARAVTSSSRPRVP 162
P+ + + VP+P P PR RPR P
Sbjct: 56 PMRAKLAVPVPSPAPPRPPSVTFRCLRPRTP 86
>12_02_0792 - 23191120-23191313,23191419-23191775,23192027-23192108,
23192186-23193097,23193190-23193346,23193540-23193694,
23194667-23194819,23195334-23195627,23195711-23195896,
23196062-23196662,23196868-23196992,23197101-23197197,
23197299-23197411,23198129-23198233
Length = 1176
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = -1
Query: 559 EKDKENR-VRRKIAVPDGDWEEKDKEPADDLD--NAKQSKP 446
E+D+E R +R + G +KDK P++D+D A QSKP
Sbjct: 952 EQDEEEREIRMALLASSGRASQKDK-PSEDVDGATAAQSKP 991
>06_03_0163 -
17380601-17380710,17380796-17380856,17381076-17381150,
17381538-17381600,17381679-17381755,17382432-17382515,
17382610-17382654,17382729-17382789,17383658-17384053,
17384220-17384289,17387010-17387083,17387202-17387246,
17387342-17387391,17387846-17387947,17388587-17388620,
17388681-17388758,17388915-17388965,17389082-17389085,
17389182-17389256,17389530-17389624
Length = 549
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = -1
Query: 562 PEKDKENRVRRKIAVPDGDWEEKDKEPADDLDNAKQSKPWYPRFEECLKTDAAWRDADAA 383
PE K+ +V + IAV D E+ PAD +Q E+ + ++A + DAA
Sbjct: 211 PEGSKDVQVGQPIAVTVEDLEDIKNIPADASFGGEQK-------EQSIASEAQKVETDAA 263
Query: 382 HEIRTDDRLHPGQKL 338
E R+ P KL
Sbjct: 264 KESSIITRISPAAKL 278
>03_06_0464 +
34126930-34127065,34127149-34127333,34127444-34127632,
34128309-34128471,34129046-34129232,34129467-34129611
Length = 334
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -1
Query: 520 VPDGDW---EEKDKEPADDLDNAKQSKPWYPRFEECLKTDAAWRDAD 389
VP W E +D+ DLD +++ WYP + L AAW+ A+
Sbjct: 144 VPSPGWPAGEVRDERCWTDLDYCEKNGVWYPA-SKTLAEKAAWKFAE 189
>03_02_0630 +
9964593-9964738,9965548-9965603,9965895-9966745,
9966848-9967046,9967246-9967425,9967591-9967967,
9968625-9968765
Length = 649
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 220 STEFFSSESRGKAPVGGFQMAPGGERKKSQLSPDEETP 107
S + S S G++ +G ++PGGER + + TP
Sbjct: 156 SFSYTPSRSLGQSRIGSSNLSPGGERLTTSVQISPSTP 193
>02_05_0974 - 33218817-33219634,33220733-33221012
Length = 365
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = -1
Query: 289 VKDHRLEAGVWLYNRRDADDFACSTEFFSSESRGKAPVGGFQMAPGGERKKSQLSPDEET 110
++D R VWL A++ A + + + RGK F AP +K+ S +
Sbjct: 135 IRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFPEAPTTAQKRRAGSTTAKA 194
Query: 109 PDEELERRLKNLRGFN 62
P +E++ FN
Sbjct: 195 PKSSVEQKPTVKPAFN 210
>11_06_0647 + 25870470-25870744,25870765-25871533
Length = 347
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = -1
Query: 568 ERPEKDKENRVRRKIAVPDGDWEEKDKEPADDLDNAKQSKPWY 440
E+ E+ +E+ R + A +G+ + DKE ++ + K ++ W+
Sbjct: 220 EKTEEFEEDEKREECAEEEGENTQDDKEESERQEEEKTTEEWH 262
>08_01_0560 -
4954479-4954746,4955106-4955167,4955208-4955284,
4955421-4955541
Length = 175
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 451 KPWYPRF-EECLKTDAAWRDADAAHEI 374
KP +P F ++ KTD WRD D +E+
Sbjct: 65 KPKFPEFADKFSKTDRFWRDFDHCYEL 91
>08_01_0352 + 3102552-3105243,3105684-3105748,3105824-3106492
Length = 1141
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +1
Query: 421 GTPQSAGTRASIASHYPNRLRVPYLSPPSLHRVLQSFS*LCSLYPSLAFP 570
G P+ R SI H R+ +S PS R L F CS +PS+ P
Sbjct: 528 GEPEYRCRRLSIHEHND---RIKSVSDPSRLRSLYHFDVTCSSFPSVGTP 574
>06_03_0046 - 15852653-15854560
Length = 635
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 174 PTGAFPRLSELKNSVLQAKSSASR 245
P G FP+LS N V +AKSS ++
Sbjct: 271 PVGKFPKLSSRNNLVWRAKSSPAK 294
>02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580
Length = 726
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +3
Query: 174 PTGAFPRLSELKNSVLQAKSSASR--LL*SHTPASSR 278
P G FP+LS N V ++KSS ++ + H P+S R
Sbjct: 272 PVGKFPKLSSEDNLVWRSKSSPAKKTAVSPHIPSSPR 308
>01_06_0482 - 29672720-29673854,29673941-29676267
Length = 1153
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 710 PPXADGPXAIXKLSFKLSCIGVVYCCTSA 796
P D P K S +LSC+GV C SA
Sbjct: 481 PEQFDSPIVEGKRSRRLSCVGVTEGCNSA 509
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,601,554
Number of Sequences: 37544
Number of extensions: 418543
Number of successful extensions: 1582
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1579
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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