Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_H01
(802 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U82936-1|AAB40869.1| 682|Caenorhabditis elegans protein kinase ... 34 0.10
U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase ... 34 0.10
U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase ... 34 0.10
U29376-4|AAM51504.1| 682|Caenorhabditis elegans Protein kinase ... 34 0.10
U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase ... 34 0.10
AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical ... 34 0.14
AF038619-6|AAB92077.2| 442|Caenorhabditis elegans Hypothetical ... 28 6.8
AC006603-6|ABB51200.1| 534|Caenorhabditis elegans Hypothetical ... 28 6.8
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 28 8.9
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 28 8.9
AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical... 28 8.9
AL021175-6|CAA15968.1| 363|Caenorhabditis elegans Hypothetical ... 28 8.9
AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical ... 28 8.9
>U82936-1|AAB40869.1| 682|Caenorhabditis elegans protein kinase C2
B isoform protein.
Length = 682
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 286 KDHRLEAGVWLYNRRDADDFACSTEFFSSESRGKAPVGGFQM--APGGERKKSQLSPDEE 113
KD RL VW ++R +DF S F SE +A G +++ A GE ++P+ +
Sbjct: 239 KDRRLSIEVWDWDRTSRNDFMGSLSFGISELMKEAASGWYKLLSAEEGEFYNINITPEYD 298
Query: 112 TPDEELERRL 83
E++ +++
Sbjct: 299 EDMEKVRKKM 308
>U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase C2
A isoform protein.
Length = 680
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 286 KDHRLEAGVWLYNRRDADDFACSTEFFSSESRGKAPVGGFQM--APGGERKKSQLSPDEE 113
KD RL VW ++R +DF S F SE +A G +++ A GE ++P+ +
Sbjct: 239 KDRRLSIEVWDWDRTSRNDFMGSLSFGISELMKEAASGWYKLLSAEEGEFYNINITPEYD 298
Query: 112 TPDEELERRL 83
E++ +++
Sbjct: 299 EDMEKVRKKM 308
>U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase c
protein 2, isoformc protein.
Length = 936
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 286 KDHRLEAGVWLYNRRDADDFACSTEFFSSESRGKAPVGGFQM--APGGERKKSQLSPDEE 113
KD RL VW ++R +DF S F SE +A G +++ A GE ++P+ +
Sbjct: 379 KDRRLSIEVWDWDRTSRNDFMGSLSFGISELMKEAASGWYKLLSAEEGEFYNINITPEYD 438
Query: 112 TPDEELERRL 83
E++ +++
Sbjct: 439 EDMEKVRKKM 448
>U29376-4|AAM51504.1| 682|Caenorhabditis elegans Protein kinase c
protein 2, isoformb protein.
Length = 682
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 286 KDHRLEAGVWLYNRRDADDFACSTEFFSSESRGKAPVGGFQM--APGGERKKSQLSPDEE 113
KD RL VW ++R +DF S F SE +A G +++ A GE ++P+ +
Sbjct: 239 KDRRLSIEVWDWDRTSRNDFMGSLSFGISELMKEAASGWYKLLSAEEGEFYNINITPEYD 298
Query: 112 TPDEELERRL 83
E++ +++
Sbjct: 299 EDMEKVRKKM 308
>U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase c
protein 2, isoforma protein.
Length = 680
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 286 KDHRLEAGVWLYNRRDADDFACSTEFFSSESRGKAPVGGFQM--APGGERKKSQLSPDEE 113
KD RL VW ++R +DF S F SE +A G +++ A GE ++P+ +
Sbjct: 239 KDRRLSIEVWDWDRTSRNDFMGSLSFGISELMKEAASGWYKLLSAEEGEFYNINITPEYD 298
Query: 112 TPDEELERRL 83
E++ +++
Sbjct: 299 EDMEKVRKKM 308
>AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical
protein C27A12.2 protein.
Length = 625
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = -1
Query: 625 KRECXQN*MTWV*RRQVPVERPEKDKENRVRRKIAVPDGDWEEKDKEPADDLDNAKQSKP 446
+++C Q +TWV Q VE E+D+E+ +G++ + D+E DD+ +A S+P
Sbjct: 558 EKKCEQTYVTWVEGEQQSVESGEEDEES---------NGEYPDDDEEYMDDMIDASTSQP 608
>AF038619-6|AAB92077.2| 442|Caenorhabditis elegans Hypothetical
protein F56A11.6 protein.
Length = 442
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = -1
Query: 568 ERPEKDKENRVRRKIAVPDGDWEEKDKEPADDLDNAKQSKPWYPRFEECLKTDAAWRDAD 389
ER KD+E+R R + D KD+E + + K+ + + E + D RD D
Sbjct: 321 ERSRKDREDRDRERSRKEREDRSRKDREDRERERSRKEREDRSRKDRERSRQDREDRDRD 380
Query: 388 AAHEIRTDDR 359
+ DR
Sbjct: 381 RDRDRSRKDR 390
>AC006603-6|ABB51200.1| 534|Caenorhabditis elegans Hypothetical
protein B0524.1 protein.
Length = 534
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = -1
Query: 634 LMVKRECX---QN*MTWV*RRQVPVERPEKDKENRVRRKIAVPDGDWEEKDKEPADDLD 467
L+ +REC QN ++W+ RRQ E +E + R + D +WE+ + + A+ D
Sbjct: 246 LIRRRECLVDPQNLISWI-RRQEKAENLRIFQEKQKRLQEQQEDAEWEQIEAQRANSDD 303
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = -1
Query: 583 RQVPVERPEKDKENRVRRKIAVPDGDWEEKDKEPADDLDNAKQSKPWYPRFEECLKTDAA 404
R+ E PE++K+ + R P +W K E + + K +P P++ E +K + A
Sbjct: 316 RRYLFENPEEEKQASLVRGTGRPPAEWGRKQNEELEQI--RKNLEP--PKYVEQVKVEGA 371
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = -1
Query: 583 RQVPVERPEKDKENRVRRKIAVPDGDWEEKDKEPADDLDNAKQSKPWYPRFEECLKTDAA 404
R+ E PE++K+ + R P +W K E + + K +P P++ E +K + A
Sbjct: 316 RRYLFENPEEEKQASLVRGTGRPPAEWGRKQNEELEQI--RKNLEP--PKYVEQVKVEGA 371
>AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical
protein Y54G11A.14 protein.
Length = 450
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1
Query: 445 WYPRFEECLKTDAAWRDADAAHEIRT 368
W +F+EC WR+ DA +RT
Sbjct: 368 WMAKFKECGTQQFLWRELDAEELVRT 393
>AL021175-6|CAA15968.1| 363|Caenorhabditis elegans Hypothetical
protein Y6E2A.7 protein.
Length = 363
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -1
Query: 568 ERPEKDKENRVRRKIAVPDGDWEEKD--KEPADDLDNAKQSKPWYPRFEEC 422
+ P+K++ R+ + ++ D +EKD KE L KQ K W FE C
Sbjct: 88 QSPKKNQFLRIGKFLSTLRSDRDEKDVIKEFNRKLIKYKQQKRWSKMFEYC 138
>AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical
protein C18H7.10 protein.
Length = 342
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/71 (28%), Positives = 29/71 (40%)
Frame = -1
Query: 529 KIAVPDGDWEEKDKEPADDLDNAKQSKPWYPRFEECLKTDAAWRDADAAHEIRTDDRLHP 350
KI + + EE+D E D D ++K E+ K D +DAD E +DD
Sbjct: 205 KITPEEEEVEEEDVEAKGDNDKNDKNKK---NNEDAKKKDNTQKDADEEEEDNSDDEPET 261
Query: 349 GQKLDVDYTKP 317
+D P
Sbjct: 262 LDANKIDIMSP 272
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,646,418
Number of Sequences: 27780
Number of extensions: 326950
Number of successful extensions: 1201
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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