Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_G09
(811 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC965.09 |||nitrilase |Schizosaccharomyces pombe|chr 3|||Manual 57 3e-09
SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr 1|||... 49 9e-07
SPBC651.02 |||nitrilase |Schizosaccharomyces pombe|chr 2|||Manual 39 0.001
SPAC637.10c |rpn10|pus1|19S proteasome regulatory subunit Rpn10|... 27 2.4
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 27 3.2
SPCC1235.10c |sec6||exocyst complex subunit Sec6|Schizosaccharom... 27 4.2
SPCC1795.03 |gms1||UDP-galactose transporter Gms1|Schizosaccharo... 26 7.3
>SPCC965.09 |||nitrilase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 272
Score = 56.8 bits (131), Expect = 3e-09
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 3/197 (1%)
Frame = -3
Query: 746 NTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTXHPVFATRYGKIAVNICFGRHH 567
N+ + I++ GN+ G +RK H+ F+ + + + P+F T +GK+ V IC+
Sbjct: 101 NSCIYITENGNLGGVYRKVHL-----FDTERKHFKKGSDFPIFETSFGKLGVMICWDTAF 155
Query: 566 VLNWMMFGQNGAEIVFNPSATIAGEGGSEYM--WNVEARNAAITNCYFTAAINRVGYEEF 393
+ NGA+++ +A + Y W++ + A NC A NRVG +E
Sbjct: 156 PEVARIHALNGADLL-----VVATNWENPYSDDWDLVTKARAFENCIPLVAANRVGTDEK 210
Query: 392 PNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRR 213
+ F+G S GP G L ++G++ VDL+ + +R
Sbjct: 211 LS----------------FFGHSKIIGPTGKVIKALDEEKEGVISYTVDLDDAKPLRKNY 254
Query: 212 CYYMTQRL-DMYVNSLS 165
+ R+ D+Y LS
Sbjct: 255 YTFFEDRMPDLYKRLLS 271
>SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 322
Score = 48.8 bits (111), Expect = 9e-07
Identities = 37/117 (31%), Positives = 50/117 (42%), Gaps = 5/117 (4%)
Frame = -3
Query: 758 GHTLNTAVVISDTGNVIGKHRKNH-----IPRVGDFNESNYYMEGNTXHPVFATRYGKIA 594
G NTA+V +G +I HRK H IP F ES+ G+ V T YGK
Sbjct: 133 GKLYNTAMVFDPSGKLIAVHRKIHLFDIDIPGGVSFRESDSLSPGDAMTMV-DTEYGKFG 191
Query: 593 VNICFGRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTA 423
+ IC+ M+ +NG ++ P A G W + AR A+ N F A
Sbjct: 192 LGICYDIRFPELAMIAARNGCSVMIYPGAFNLSTG--PLHWELLARARAVDNEMFVA 246
>SPBC651.02 |||nitrilase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 276
Score = 38.7 bits (86), Expect = 0.001
Identities = 51/185 (27%), Positives = 72/185 (38%), Gaps = 9/185 (4%)
Frame = -3
Query: 749 LNTAVVISDT-GNVIGKHRKNHIPRVGDFN-----ESNYYMEGNTXHPVFATRYGKIAVN 588
LN+++ I G +I ++ K H+ V N ESN + G P T GK+
Sbjct: 95 LNSSLFIEPLHGEIISRYSKAHLFDVEIKNGPTLKESNTTLRGEAILPPCKTPLGKVGSA 154
Query: 587 ICFGRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAI-TNCYFTAAINR 411
ICF + GA I+ PSA G + W V R A+ + CY A
Sbjct: 155 ICFDIRFPEQAIKLRNMGAHIITYPSAFTEKTGAAH--WEVLLRARALDSQCYVIA---- 208
Query: 410 VGYEEFPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLS--RTRDGLLIAAVDLNL 237
+ GK H + YG S P G S + +GL+ A +DLNL
Sbjct: 209 ----------PAQGGK--HNEKRASYGHSMIVDPWGTVIAQYSDISSPNGLIFADLDLNL 256
Query: 236 NRQIR 222
+R
Sbjct: 257 VDHVR 261
>SPAC637.10c |rpn10|pus1|19S proteasome regulatory subunit
Rpn10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 243
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 439 FVIAAFLASTFHMYSLPPSPAIVAD 513
F+ AA + + H+ S+PPSP +++D
Sbjct: 156 FIDAANSSDSCHLVSIPPSPQLLSD 180
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 556 QFKTWCRPKQMFTAILPYLVANTGWXVLPS 645
+F T K +FTA+ P+L A T + ++PS
Sbjct: 1521 RFPTRVLCKPVFTAVPPFLFAGTDFALIPS 1550
>SPCC1235.10c |sec6||exocyst complex subunit
Sec6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 730
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -3
Query: 770 REAFGHTLNTAVVISDTG--NVIGKHRKNHIPRVGDFNESNYYMEGN 636
REAFG T++ ++ISD G ++ + P + + N+Y N
Sbjct: 512 REAFGKTVDGYILISDIGVSQIVAIISNDVKPALTSLFQPNWYQSSN 558
>SPCC1795.03 |gms1||UDP-galactose transporter
Gms1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 353
Score = 25.8 bits (54), Expect = 7.3
Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +1
Query: 493 SPAIVADGLKTISAPFCPNIIQFKTWCRPKQMFTAILPYLVANTGWXV-LPSM**L--DS 663
S A++ + L + F QF+ + A LP + W + +P+ ++
Sbjct: 51 STAVLLNELIKLVVCFSVGYHQFRKNVGKEAKLRAFLPQIFGGDSWKLAIPAFLYTCQNN 110
Query: 664 LKSPTLGMWFLRCFPITFPVSLMTTAVFKV 753
L+ G F +T+ + ++TTA+F +
Sbjct: 111 LQYVAAGNLTAASFQVTYQLKILTTAIFSI 140
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,088,307
Number of Sequences: 5004
Number of extensions: 61139
Number of successful extensions: 187
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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