Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_G04
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025460-2|AAF02169.3| 545|Caenorhabditis elegans Prion-like-(q... 34 0.13
Z46934-6|CAA87045.3| 371|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical pr... 31 0.91
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 31 0.91
J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein. 31 0.91
Z72509-5|CAA96649.1| 294|Caenorhabditis elegans Hypothetical pr... 31 1.2
U29244-13|AAC71083.1| 291|Caenorhabditis elegans Collagen prote... 30 1.6
Z81074-3|CAB03039.2| 352|Caenorhabditis elegans Hypothetical pr... 29 4.9
U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter... 29 4.9
AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical ... 29 4.9
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 29 4.9
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 29 4.9
Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical pr... 28 6.4
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 6.4
AF068720-8|AAM15583.1| 142|Caenorhabditis elegans Hypothetical ... 28 8.5
>AF025460-2|AAF02169.3| 545|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 41
protein.
Length = 545
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 549 SPAHHKMASAHMEAPWHGVSAHEGFPPNPAAPTKRTPIQGTT 424
SP HH+ ++A P SAH PP +AP P QG T
Sbjct: 71 SPPHHQKSAAPSAPPRDVTSAHAPPPPASSAPIVGAPRQGAT 112
>Z46934-6|CAA87045.3| 371|Caenorhabditis elegans Hypothetical
protein ZK1320.7 protein.
Length = 371
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -2
Query: 413 PSTAWYCKLCDQFIGDLHCASAHLKSIVHSKNYAN 309
P T +C+LCD FI + +S H+ SI H N N
Sbjct: 216 PETLTFCELCDVFI-PKNASSTHISSITHQLNDRN 249
>Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical
protein B0491.2 protein.
Length = 324
Score = 31.1 bits (67), Expect = 0.91
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 415 TKNCSPLNRCPLGGRGGVGREALVGGDAVPG 507
T NC+ N+CP G G G + G D VPG
Sbjct: 115 TCNCNADNKCPAGPSGPKGVPGVPGLDGVPG 145
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical
protein K10D2.3 protein.
Length = 1425
Score = 31.1 bits (67), Expect = 0.91
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 413 PSTAWYCKLCDQFIGDLHCASAHLKSIVH 327
P +YC+ CD I + A AHL+S H
Sbjct: 268 PEAIYYCEKCDYHINTIGHAKAHLESSTH 296
>J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein.
Length = 324
Score = 31.1 bits (67), Expect = 0.91
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 415 TKNCSPLNRCPLGGRGGVGREALVGGDAVPG 507
T NC+ N+CP G G G + G D VPG
Sbjct: 115 TCNCNADNKCPAGPSGPKGVPGVPGLDGVPG 145
>Z72509-5|CAA96649.1| 294|Caenorhabditis elegans Hypothetical
protein F32G8.5 protein.
Length = 294
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 400 QAVEGTKNCSPLNRCPLGGRGGVGREALVGGDAVPG 507
++ E NCS N CP+G G G G D PG
Sbjct: 77 RSTEQKCNCSQANNCPVGPPGPPGAAGTNGEDGSPG 112
>U29244-13|AAC71083.1| 291|Caenorhabditis elegans Collagen protein
74 protein.
Length = 291
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 412 GTKNCSPLNRCPLGGRGGVGREALVGGDAVPG 507
G+ NC N CP G G G + G D +PG
Sbjct: 79 GSCNCQADNSCPAGPAGPKGAQGSDGIDGIPG 110
>Z81074-3|CAB03039.2| 352|Caenorhabditis elegans Hypothetical
protein F32B6.3 protein.
Length = 352
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -1
Query: 609 WCRVCNDFPPTAKDYLNHXHSPAHHKMASAHMEA 508
W + ND P K H AHHK H+++
Sbjct: 206 WAKDLNDRPLDVKKTAQGMHEAAHHKQTMMHLKS 239
>U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 17 protein.
Length = 352
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 421 NCSPLNRCPLGGRGGVGREALVGGDAVPG 507
NC+ N CP G G G G D +PG
Sbjct: 146 NCNTENSCPAGPAGPKGTPGHDGPDGIPG 174
>AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical
protein Y79H2A.3b protein.
Length = 1271
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 401 WYCKLCDQFIGDLH-CASAHLKSIVHSKNYANFVE 300
W C C + +GD + A AHL S+ H +NY + E
Sbjct: 96 WTCATCYE-VGDTYELADAHLNSMDHIRNYMDECE 129
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 401 WYCKLCDQFIGDLH-CASAHLKSIVHSKNYANFVE 300
W C C + +GD + A AHL S+ H +NY + E
Sbjct: 96 WTCATCYE-VGDTYELADAHLNSMDHIRNYMDECE 129
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = -2
Query: 434 KGLQFFVPSTAWYCKLCDQFIGDLHCASAHLKSIVHSKNYANFVEQNPHWETDWMSDRQK 255
KGLQ ++C++C + D + HL S H + F E + + + +D +K
Sbjct: 19 KGLQ----KLKFFCQMCQKQCRDANGFKCHLTSEAHQRQLLLFAENSNSYLRQFSNDFEK 74
Query: 254 AF 249
F
Sbjct: 75 NF 76
>Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical
protein F58G1.2 protein.
Length = 445
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -2
Query: 416 VPSTAWYCKLCDQFIGDLHCASAHLKSIVHSKNYANFVEQNPHWETDWMSDRQK 255
V + + CK+C G++ HL+ H K Y F+E N D+M + ++
Sbjct: 107 VRKSMFRCKVCKNRFGEMSLLERHLRD-SHPKAYIAFLE-NQREMADYMGELER 158
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = -1
Query: 552 HSPAHHKMASAHMEAP-WHGVSAHEG 478
HSPAHH H AP HG H G
Sbjct: 556 HSPAHHGHHGEHHHAPAHHGHHGHHG 581
>AF068720-8|AAM15583.1| 142|Caenorhabditis elegans Hypothetical
protein K02H11.6 protein.
Length = 142
Score = 27.9 bits (59), Expect = 8.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 612 HWCRVCNDFPPTAKDY 565
HWC C +F P KD+
Sbjct: 35 HWCGPCRNFTPVLKDF 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,791,093
Number of Sequences: 27780
Number of extensions: 313070
Number of successful extensions: 1337
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1335
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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