Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_F12
(793 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0011 + 17139322-17139451,17139552-17140174 30 1.8
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 24 3.0
02_04_0654 - 24755339-24755408,24755488-24755624,24756243-247563... 24 3.2
02_05_0686 - 30900748-30902167,30903442-30904742 26 3.7
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896... 25 3.7
02_05_0002 - 24849189-24849825,24850267-24850328 25 5.3
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 28 9.8
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 9.8
10_01_0086 - 1064650-1065379,1065796-1065950,1066029-1066141,106... 28 9.8
09_02_0327 - 7284829-7284889,7284946-7286126 28 9.8
08_02_0835 + 21636358-21636673,21637182-21637729 28 9.8
08_02_0309 - 15622877-15623710 28 9.8
08_01_0193 + 1599970-1600503,1601488-1601919,1602010-1602147,160... 28 9.8
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533... 28 9.8
07_01_0789 - 6150257-6151046,6151167-6151390,6151816-6151991,615... 28 9.8
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979 28 9.8
06_01_0561 - 3983308-3983564,3983652-3983775 28 9.8
05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,300... 28 9.8
04_03_0977 + 21381857-21383757,21384299-21384458,21384669-213847... 28 9.8
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 28 9.8
>05_04_0011 + 17139322-17139451,17139552-17140174
Length = 250
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 755 PPPPPPXXPPXGG 793
PPPPPP PP GG
Sbjct: 68 PPPPPPPSPPNGG 80
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 755 PPPPPPXXPPXGG 793
PPPPPP PP GG
Sbjct: 104 PPPPPPPSPPNGG 116
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 755 PPPPPPXXPPXG 790
PPPPPP PP G
Sbjct: 172 PPPPPPPSPPNG 183
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 24.2 bits (50), Expect(2) = 3.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 757 PPPPPPXXXXGG 792
PPPPPP GG
Sbjct: 64 PPPPPPARSGGG 75
Score = 23.8 bits (49), Expect(2) = 3.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 754 PPPPPPP 774
PPPPPPP
Sbjct: 53 PPPPPPP 59
>02_04_0654 -
24755339-24755408,24755488-24755624,24756243-24756326,
24756929-24756944,24758035-24758405
Length = 225
Score = 24.2 bits (50), Expect(2) = 3.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 757 PPPPPPXXXXGG 792
PPPPPP GG
Sbjct: 64 PPPPPPFPKGGG 75
Score = 23.8 bits (49), Expect(2) = 3.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 754 PPPPPPP 774
PPPPPPP
Sbjct: 33 PPPPPPP 39
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 25.8 bits (54), Expect(2) = 3.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 755 PPPPPPXXPP 784
PPPPPP PP
Sbjct: 336 PPPPPPKGPP 345
Score = 21.8 bits (44), Expect(2) = 3.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 758 PPPPPXXPPXG 790
P PPP PP G
Sbjct: 362 PSPPPPPPPGG 372
>01_01_1130 +
8959909-8960396,8960588-8960638,8960736-8960827,
8960964-8961054,8961877-8961937,8962172-8962216,
8962318-8962391,8962565-8962637,8963288-8963345,
8963398-8963468,8963801-8963837,8964040-8964128,
8964207-8964263,8964366-8964449,8964529-8964627,
8964765-8964869,8965145-8965216,8965308-8965497,
8965810-8966207
Length = 744
Score = 25.0 bits (52), Expect(2) = 3.7
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 758 PPPPPXXPPXGG 793
PPPPP PP G
Sbjct: 82 PPPPPPPPPTNG 93
Score = 22.6 bits (46), Expect(2) = 3.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 755 PPPPPPXXPP 784
P PPPP PP
Sbjct: 80 PSPPPPPPPP 89
>02_05_0002 - 24849189-24849825,24850267-24850328
Length = 232
Score = 25.0 bits (52), Expect(2) = 5.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 758 PPPPPXXPPXGG 793
PPPPP PP G
Sbjct: 218 PPPPPPPPPSAG 229
Score = 22.2 bits (45), Expect(2) = 5.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 755 PPPPPPXXPP 784
P PPPP PP
Sbjct: 216 PHPPPPPPPP 225
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 755 PPPPPPXXPPXG 790
PPPPPP PP G
Sbjct: 349 PPPPPPPEPPTG 360
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 755 PPPPPPXXPPXGG 793
PPPPPP PP G
Sbjct: 544 PPPPPPPPPPPSG 556
Score = 23.0 bits (47), Expect(2) = 10.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 755 PPPPPPXXP 781
PPPPPP P
Sbjct: 568 PPPPPPPLP 576
Score = 23.0 bits (47), Expect(2) = 10.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 758 PPPPPXXPP 784
PPPPP PP
Sbjct: 602 PPPPPPPPP 610
Score = 23.0 bits (47), Expect(2) = 10.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 755 PPPPPPXXP 781
PPPPPP P
Sbjct: 605 PPPPPPILP 613
Score = 23.0 bits (47), Expect(2) = 10.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 758 PPPPPXXPP 784
PPPPP PP
Sbjct: 618 PPPPPPPPP 626
>10_01_0086 -
1064650-1065379,1065796-1065950,1066029-1066141,
1066238-1066345,1066773-1066890,1066996-1067069,
1067595-1067690,1068062-1068455
Length = 595
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 755 PPPPPPXXPPXG 790
PPPPPP PP G
Sbjct: 107 PPPPPPPRPPSG 118
>09_02_0327 - 7284829-7284889,7284946-7286126
Length = 413
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 755 PPPPPPXXPPXG 790
PPPPPP PP G
Sbjct: 58 PPPPPPPPPPRG 69
>08_02_0835 + 21636358-21636673,21637182-21637729
Length = 287
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 755 PPPPPPXXPPXG 790
PPPPPP PP G
Sbjct: 271 PPPPPPSSPPAG 282
>08_02_0309 - 15622877-15623710
Length = 277
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 755 PPPPPPXXPPXG 790
PPPPPP PP G
Sbjct: 80 PPPPPPRAPPGG 91
>08_01_0193 +
1599970-1600503,1601488-1601919,1602010-1602147,
1602532-1602600
Length = 390
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 755 PPPPPPXXPPXG 790
PPPPPP PP G
Sbjct: 22 PPPPPPPLPPRG 33
>07_03_1147 +
24349811-24350161,24351031-24351366,24353260-24353376,
24353585-24353647,24354066-24354139,24354216-24354306,
24354791-24354850,24355270-24355462,24356242-24356522,
24357435-24357536,24357664-24357774,24358410-24358475,
24358562-24358660,24358757-24358788,24359171-24359274,
24359380-24359507,24359625-24359756,24360051-24360359,
24360887-24361071,24361161-24361263,24361407-24361552,
24361748-24361827,24361901-24362103
Length = 1121
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 755 PPPPPPXXPPXG 790
PPPPPP PP G
Sbjct: 65 PPPPPPPQPPVG 76
>07_01_0789 -
6150257-6151046,6151167-6151390,6151816-6151991,
6152778-6153801
Length = 737
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 755 PPPPPPXXPPXG 790
PPPPPP PP G
Sbjct: 105 PPPPPPPLPPHG 116
>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
Length = 304
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 755 PPPPPPXXPPXG 790
PPPPPP PP G
Sbjct: 85 PPPPPPQKPPQG 96
>06_01_0561 - 3983308-3983564,3983652-3983775
Length = 126
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 755 PPPPPPXXPPXG 790
PPPPPP PP G
Sbjct: 31 PPPPPPPPPPSG 42
>05_01_0384 +
2997465-2999777,2999960-3000035,3003027-3003102,
3003571-3004442,3004592-3004773,3005206-3005295,
3005388-3005675,3005776-3005997,3006053-3006133,
3006634-3006861
Length = 1475
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 755 PPPPPPXXPPXGG 793
PPPPPP PP G
Sbjct: 581 PPPPPPPPPPAAG 593
>04_03_0977 +
21381857-21383757,21384299-21384458,21384669-21384717,
21385117-21385169
Length = 720
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 755 PPPPPPXXPPXG 790
PPPPPP PP G
Sbjct: 101 PPPPPPPPPPQG 112
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 755 PPPPPPXXPPXG 790
PPPPPP PP G
Sbjct: 424 PPPPPPPPPPVG 435
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,529,922
Number of Sequences: 37544
Number of extensions: 423347
Number of successful extensions: 16534
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8112
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -