Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_F12
         (793 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr...    26   0.40 
Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical pr...    26   0.41 

>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
           protein C33B4.3a protein.
          Length = 1110

 Score = 25.8 bits (54), Expect(2) = 0.40
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 755 PPPPPPXXPP 784
           PPPPPP  PP
Sbjct: 765 PPPPPPPPPP 774



 Score = 25.0 bits (52), Expect(2) = 0.40
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 758 PPPPPXXPPXG 790
           PPPPP  PP G
Sbjct: 808 PPPPPPPPPGG 818


>Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical
           protein C33B4.3b protein.
          Length = 993

 Score = 25.8 bits (54), Expect(2) = 0.41
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 755 PPPPPPXXPP 784
           PPPPPP  PP
Sbjct: 765 PPPPPPPPPP 774



 Score = 25.0 bits (52), Expect(2) = 0.41
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 758 PPPPPXXPPXG 790
           PPPPP  PP G
Sbjct: 808 PPPPPPPPPGG 818


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,540,889
Number of Sequences: 27780
Number of extensions: 203182
Number of successful extensions: 4315
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2052
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)