Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_F11
(766 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 35 0.073
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 35 0.073
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.29
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.29
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 0.90
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 0.90
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 1.2
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 25 1.4
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 25 1.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 3.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.6
AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical ... 29 3.6
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 3.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.6
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 3.6
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 3.6
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.6
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 4.8
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.8
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 4.8
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 4.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.8
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 23 5.2
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 8.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 8.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 8.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 8.4
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 8.4
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 34.7 bits (76), Expect = 0.073
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXGXGXXG 579
PPPPPP G G PP PP G G
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
Score = 34.7 bits (76), Expect = 0.073
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 683 PXPPPPPPXXXXXXXXXGGGGXXPPXPPXGXG 588
P PPPPPP G PP PP G G
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 661
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -3
Query: 683 PXPPPPPPXXXXXXXXXGGGGXXPPXPPXGXG 588
P PPPPPP PP PP G
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMG 640
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 34.7 bits (76), Expect = 0.073
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXGXGXXG 579
PPPPPP G G PP PP G G
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
Score = 34.7 bits (76), Expect = 0.073
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 683 PXPPPPPPXXXXXXXXXGGGGXXPPXPPXGXG 588
P PPPPPP G PP PP G G
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 487
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -3
Query: 683 PXPPPPPPXXXXXXXXXGGGGXXPPXPPXGXG 588
P PPPPPP PP PP G
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMG 466
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 601 GGXGGXXPPPPXXXXXXXXXGGGGGGXG 684
GG GG PPP GGGGGG G
Sbjct: 46 GGCGGGCAPPPPPPACGGGCGGGGGGCG 73
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 601 GGXGGXXPPPPXXXXXXXXXGGGGGGXG 684
GG GG PPP GGGGGG G
Sbjct: 103 GGCGGGCAPPPPPPACGGGCGGGGGGCG 130
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 601 GGXGGXXPPPPXXXXXXXXXGGGGGGXG 684
G GG PPPP GGGGG G
Sbjct: 47 GCGGGCAPPPPPPACGGGCGGGGGGCGG 74
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 601 GGXGGXXPPPPXXXXXXXXXGGGGGGXG 684
G GG PPPP GGGGG G
Sbjct: 104 GCGGGCAPPPPPPACGGGCGGGGGGCGG 131
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXGXGXXG 579
PPPPPP G G PP PP G G
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPG 329
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPP 600
PPPPPP G GG PP PP
Sbjct: 317 PPPPPPSRFGPP---GMGGMPPPPPP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXGXGXXG 579
PPPPPP G G PP PP G G
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPG 339
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPP 600
PPPPPP G GG PP PP
Sbjct: 327 PPPPPPSRFGPP---GMGGMPPPPPP 349
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 683 PXPPPPPPXXXXXXXXXGGGGXXPPXPPXGXGXXG 579
P PPPP GGGG PP P G G
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 683 PXPPPPPPXXXXXXXXXGGGGXXPPXPPXGXGXXG 579
P PPPP GGGG PP P G G
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXGXG 588
PPPPP G PP PP G G
Sbjct: 43 PPPPPTGEPQDLSGEGNASRRPPPPPKGTG 72
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXGXG 588
PPPPP G PP PP G G
Sbjct: 106 PPPPPTGEPQDLSGEGNASRRPPPPPKGTG 135
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXGXG 588
PPPPP G PP PP G G
Sbjct: 137 PPPPPTGEPQDLSGEGNASRRPPPPPKGTG 166
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXGXG 588
PPPPP G PP PP G G
Sbjct: 168 PPPPPTGEPQDLSTEGNASRRPPPPPKGTG 197
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXGXG 588
PPPPP G PP PP G G
Sbjct: 261 PPPPPTGEPQDLSGEGNASRRPPPPPKGTG 290
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXGXG 588
PPPPP G PP PP G G
Sbjct: 199 PPPPPTGEPQDLSAEGYASRRPPPPPKGTG 228
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 25.4 bits (53), Expect(2) = 1.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXG 594
PPPPPP G PP PP G
Sbjct: 794 PPPPPPLPPISS---GAPPPPPPPPPGG 818
Score = 23.4 bits (48), Expect(2) = 1.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 683 PXPPPPPP 660
P PPPPPP
Sbjct: 765 PPPPPPPP 772
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 25.4 bits (53), Expect(2) = 1.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXG 594
PPPPPP G PP PP G
Sbjct: 794 PPPPPPLPPISS---GAPPPPPPPPPGG 818
Score = 23.4 bits (48), Expect(2) = 1.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 683 PXPPPPPP 660
P PPPPPP
Sbjct: 767 PPPPPPPP 774
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 601 GGXGGXXPPPPXXXXXXXXXGGGGGGXG 684
GG GG PPP GGG GG G
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGCGGGG 70
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 601 GGXGGXXPPPPXXXXXXXXXGGGGGGXG 684
GG GG PPP GGG GG G
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGG 94
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -3
Query: 683 PXPPPPPPXXXXXXXXXGGGGXXPPXPPXGXG 588
P PPPPPP GGG G G
Sbjct: 302 PPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGG 333
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 601 GGXGGXXPPPPXXXXXXXXXGGGGGGXG 684
GG GG PPP GGG GG G
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGCGGGG 70
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 601 GGXGGXXPPPPXXXXXXXXXGGGGGGXG 684
GG GG PPP GGG GG G
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGG 94
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -3
Query: 683 PXPPPPPPXXXXXXXXXGGGGXXPPXPPXGXG 588
P PPPPPP GGG G G
Sbjct: 302 PPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGG 333
>Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical
protein Y41E3.16 protein.
Length = 720
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 701 FFXXXXPXPPPPPPXXXXXXXXXGGGGXXPPXP 603
FF P PP PP GGGG P P
Sbjct: 491 FFNQPLPPPPAHPPKIGAHPLVMGGGGGVPMIP 523
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +1
Query: 595 PXGGXGGXXPPPPXXXXXXXXXGGGGGGXG 684
P GG GG PPP GGGGGG G
Sbjct: 264 PMGGGGGYPQPPP-------QQGGGGGGAG 286
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 683 PXPPPPPPXXXXXXXXXGGGGXXPPXPP 600
P PPPPPP GGG PP PP
Sbjct: 39 PPPPPPPP--------CGGGYEAPPPPP 58
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXG 594
PPPPPP GG PP PP G
Sbjct: 742 PPPPPPPGGLPPI--SGGPPPPPPPPGG 767
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXG 594
PPPPPP GG PP PP G
Sbjct: 726 PPPPPPPGGLPPIT---GGPPPPPPPGG 750
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Frame = -3
Query: 683 PXPPPPP---PXXXXXXXXXGGGGXXPPXPPXG 594
P PPPPP P G G PP PP G
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 5/33 (15%)
Frame = -3
Query: 683 PXPPPPPP---XXXXXXXXXGG--GGXXPPXPP 600
P PPPPPP GG GG PP PP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXG 594
PPPPPP GG PP PP G
Sbjct: 742 PPPPPPPGGLPPI--SGGPPPPPPPPGG 767
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXG 594
PPPPPP GG PP PP G
Sbjct: 726 PPPPPPPGGLPPIT---GGPPPPPPPGG 750
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Frame = -3
Query: 683 PXPPPPP---PXXXXXXXXXGGGGXXPPXPPXG 594
P PPPPP P G G PP PP G
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 5/33 (15%)
Frame = -3
Query: 683 PXPPPPPP---XXXXXXXXXGG--GGXXPPXPP 600
P PPPPPP GG GG PP PP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical
protein Y48C3A.8 protein.
Length = 291
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 601 GGXGGXXPPPPXXXXXXXXXGGGGGG 678
GG GG PPPP GGG G
Sbjct: 160 GGGGGSVPPPPPAATAAVSMNGGGPG 185
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 589 PXPXGGXGGXXPPPPXXXXXXXXXGGGGG 675
P GG G PPPP GGG G
Sbjct: 157 PTGGGGGGSVPPPPPAATAAVSMNGGGPG 185
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXGXG 588
P PPPP G PP PP G G
Sbjct: 216 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAG 245
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXG 594
PPPPPP GG PP PP G
Sbjct: 325 PPPPPPPGGLPPI--SGGPPPPPPPPGG 350
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXG 594
PPPPPP GG PP PP G
Sbjct: 309 PPPPPPPGGLPPIT---GGPPPPPPPGG 333
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Frame = -3
Query: 683 PXPPPPP---PXXXXXXXXXGGGGXXPPXPPXG 594
P PPPPP P G G PP PP G
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 5/33 (15%)
Frame = -3
Query: 683 PXPPPPPP---XXXXXXXXXGG--GGXXPPXPP 600
P PPPPPP GG GG PP PP
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXGXG 588
P PPPP G PP PP G G
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAG 231
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXPPXPPXGXG 588
P PPPP G PP PP G G
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAG 231
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 683 PXPPPPPPXXXXXXXXXGGGGXXPPXPPXG 594
P PPPPPP GG PP PP G
Sbjct: 576 PPPPPPPPPML--------GGPPPPPPPPG 597
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 683 PXPPPPPPXXXXXXXXXGGGGXXPPXPP 600
P PPPP GGGG PP P
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGGMYPPLIP 814
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
Frame = +1
Query: 589 PXPXGGXGGXXPPPPXXXXXXXXXG---GGGGGXG 684
P GG GG PPPP G GG GG G
Sbjct: 400 PQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFG 434
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 683 PXPPPPPPXXXXXXXXXGGGGXXPPXPP 600
P PPPP GGGG PP P
Sbjct: 787 PGAPPPPGMRPPPGAPGGGGGMYPPLIP 814
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Frame = -3
Query: 683 PXPPPP--PPXXXXXXXXXGGG-GXXPPXPPXGXGXXG 579
P PP P PP GGG G PP PP G G
Sbjct: 255 PGPPGPAGPPGPPGNNGAPGGGYGVGPPGPPGPSGRPG 292
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 683 PXPPPPPPXXXXXXXXXGGGGXXPPXPP 600
P PPPPPP G PP PP
Sbjct: 1354 PVPPPPPPPPTMSKAPTGVPLPVPPPPP 1381
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 23.4 bits (48), Expect(2) = 5.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 683 PXPPPPPP 660
P PPPPPP
Sbjct: 360 PPPPPPPP 367
Score = 23.4 bits (48), Expect(2) = 5.2
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -3
Query: 677 PPPPPPXXXXXXXXXGGGGXXP 612
PPPPPP G G P
Sbjct: 361 PPPPPPPPPPSAASNGRSGYLP 382
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 683 PXPPPPPPXXXXXXXXXGGGGXXPPXPPXG 594
P PPPPP GG PP PP G
Sbjct: 770 PPPPPPPSAIPLPPRLQGG---IPPPPPLG 796
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 3/38 (7%)
Frame = -3
Query: 683 PXPP---PPPPXXXXXXXXXGGGGXXPPXPPXGXGXXG 579
P PP PPPP G PP PP G G
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 310
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 3/38 (7%)
Frame = -3
Query: 683 PXPP---PPPPXXXXXXXXXGGGGXXPPXPPXGXGXXG 579
P PP PPPP G PP PP G G
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 331
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 3/38 (7%)
Frame = -3
Query: 683 PXPP---PPPPXXXXXXXXXGGGGXXPPXPPXGXGXXG 579
P PP PPPP G PP PP G G
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 316
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 683 PXPPPPPPXXXXXXXXXGGGGXXPPXPPXG 594
P PPPPP GG PP PP G
Sbjct: 770 PPPPPPPSAIPLPPRLQGG---IPPPPPLG 796
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,785,413
Number of Sequences: 27780
Number of extensions: 171472
Number of successful extensions: 3607
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2296
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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