Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_F09
         (886 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical p...    30   2.5  
AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical ...    30   2.5  
AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical ...    30   2.5  
Z81128-4|CAB03403.1|  898|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AC006792-1|AAF60741.2|  642|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical
           protein T25E12.4a protein.
          Length = 1101

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +3

Query: 573 SCVKLLSVPRPRLESGGWIGPGVFYGGQNSVDGVSRRSDGSLNELC**TPRKLRHCSWA 749
           SC++ L   RP    GG   P +F    +  D V     G+  ++    PRK R CSW+
Sbjct: 404 SCLEALDAARPSSTLGGAATPNIFITSDDCGDAVG----GNYLQM----PRKDRSCSWS 454


>Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical
           protein T25E12.4a protein.
          Length = 1101

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +3

Query: 573 SCVKLLSVPRPRLESGGWIGPGVFYGGQNSVDGVSRRSDGSLNELC**TPRKLRHCSWA 749
           SC++ L   RP    GG   P +F    +  D V     G+  ++    PRK R CSW+
Sbjct: 404 SCLEALDAARPSSTLGGAATPNIFITSDDCGDAVG----GNYLQM----PRKDRSCSWS 454


>AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical
           protein T25E12.4a protein.
          Length = 1101

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +3

Query: 573 SCVKLLSVPRPRLESGGWIGPGVFYGGQNSVDGVSRRSDGSLNELC**TPRKLRHCSWA 749
           SC++ L   RP    GG   P +F    +  D V     G+  ++    PRK R CSW+
Sbjct: 404 SCLEALDAARPSSTLGGAATPNIFITSDDCGDAVG----GNYLQM----PRKDRSCSWS 454


>AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical
           protein T25E12.4a protein.
          Length = 1101

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +3

Query: 573 SCVKLLSVPRPRLESGGWIGPGVFYGGQNSVDGVSRRSDGSLNELC**TPRKLRHCSWA 749
           SC++ L   RP    GG   P +F    +  D V     G+  ++    PRK R CSW+
Sbjct: 404 SCLEALDAARPSSTLGGAATPNIFITSDDCGDAVG----GNYLQM----PRKDRSCSWS 454


>Z81128-4|CAB03403.1|  898|Caenorhabditis elegans Hypothetical
           protein T23D8.4 protein.
          Length = 898

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 603 PRLESGGWIGPGVFYGGQNSVDGVSRRSDG 692
           PR   GG+ GPG ++ G+N   G  ++  G
Sbjct: 833 PRTGRGGYQGPGSWFPGRNERQGDKQKGSG 862


>AC006792-1|AAF60741.2|  642|Caenorhabditis elegans Hypothetical
           protein Y50C1A.1 protein.
          Length = 642

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/63 (26%), Positives = 25/63 (39%)
 Frame = +1

Query: 313 SSDRLRRPRSTGPXXARITVFGCNFVMLDTLSLINIICPPTYQ**RIRASTMDITQCSRN 492
           S  R R  RS       +T  GC+        + NI+C   +   ++   T +  Q   N
Sbjct: 518 SDSRKRISRSFSASSLMLTCIGCDSEFKPASQVTNIMCDQCFAWQKMSVLTSNCDQFMGN 577

Query: 493 SGP 501
           SGP
Sbjct: 578 SGP 580


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,724,331
Number of Sequences: 27780
Number of extensions: 358673
Number of successful extensions: 757
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)