Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_F06
(1164 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 2.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.7
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 2.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 2.7
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 859 PPPPXGGXXXXXXXXXPPPPP 921
PPPP GG PPPPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPP 748
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 859 PPPPXGGXXXXXXXXXPPPPP 921
PPPP GG PPPPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPP 764
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 859 PPPPXGGXXXXXXXXXPPPPP 921
PPPP GG PPPPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPP 748
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 859 PPPPXGGXXXXXXXXXPPPPP 921
PPPP GG PPPPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPP 764
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 859 PPPPXGGXXXXXXXXXPPPPP 921
PPPP GG PPPPP
Sbjct: 218 PPPPIGGIAPVNAHGAPPPPP 238
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 859 PPPPXGGXXXXXXXXXPPPPP 921
PPPP GG PPPPP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPP 331
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 859 PPPPXGGXXXXXXXXXPPPPP 921
PPPP GG PPPPP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPP 347
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 859 PPPPXGGXXXXXXXXXPPPPP 921
PPPP GG PPPPP
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPP 301
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 859 PPPPXGGXXXXXXXXXPPPPP 921
PPPP GG PPPPP
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPP 322
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 859 PPPPXGGXXXXXXXXXPPPPP 921
PPPP GG PPPPP
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPP 307
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 859 PPPPXGGXXXXXXXXXPPPPP 921
PPPP GG PPPPP
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPP 224
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 859 PPPPXGGXXXXXXXXXPPPPP 921
PPPP GG PPPPP
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPP 224
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,129,964
Number of Sequences: 27780
Number of extensions: 223918
Number of successful extensions: 746
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3172075232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -