Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_F05
         (831 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0258 + 19490256-19491569                                         31   0.85 
11_06_0081 + 19886848-19888050,19888243-19888896                       28   7.9  

>05_04_0258 + 19490256-19491569
          Length = 437

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -3

Query: 688 TIEHXRHSVLPEQATFDLX-ATVQYNCHTGYVTNGFPRAKC 569
           T+   R   +P +A  DL  AT+  +C TGYV++ + R  C
Sbjct: 50  TVFRQRTPQVPVKAVLDLAGATLWVDCDTGYVSSSYARVPC 90


>11_06_0081 + 19886848-19888050,19888243-19888896
          Length = 618

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +3

Query: 462 QSAXTQPXGTSPGSPQNRGSQVISGPYQXACPSIAKHLARGKPLVTYPV 608
           Q+   Q  G +P      G +V + P + ACPS A+  A  + LVTY V
Sbjct: 161 QAVQEQALGDAPARSLLAGQRV-TVPLRCACPSAAQAAAGVRYLVTYLV 208


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,740,369
Number of Sequences: 37544
Number of extensions: 247160
Number of successful extensions: 565
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)