Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_F04
         (805 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_08_0079 + 28189782-28189907,28190445-28190553,28190876-281909...    30   1.9  
07_01_1157 + 10954619-10954835,10956078-10957114                       29   4.3  
02_04_0451 + 23021139-23021269,23021366-23021498,23021594-230217...    29   4.3  
01_07_0306 + 42638683-42638990,42639074-42639314,42639935-426402...    29   4.3  
10_01_0085 + 1061962-1062141,1062283-1062431,1062734-1062819,106...    28   7.6  
07_01_0130 - 963856-965454                                             28   7.6  
02_05_1011 + 33487670-33487958,33490794-33492100,33492541-334928...    28   7.6  
03_06_0189 + 32214702-32215154                                         28   10.0 

>11_08_0079 +
           28189782-28189907,28190445-28190553,28190876-28190958,
           28191500-28191562,28191658-28192854,28193247-28193310,
           28193338-28193426,28194404-28194463,28195442-28195547,
           28196057-28196069,28196940-28197111
          Length = 693

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -1

Query: 175 PGNPLKLLRAGDWGLQLSPINEEFLVSASHKLALITSLPFVHTARRYYRLNDLK 14
           PG  L + R G+ GL  + I +E  +S +HK   + SL   H     Y + +LK
Sbjct: 284 PGQRLIIARGGEGGLGNACILKEMWLSKAHKEEEMASLSTGHPGTETYLILELK 337


>07_01_1157 + 10954619-10954835,10956078-10957114
          Length = 417

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +2

Query: 593 LQPYSPRSPKSLVSRKLXXEHCSNVGGSLDDIFTGRTRAVSNRLRTSN 736
           + PYSP+ P++ + RK+       V GSL  + T  + A+ + + TS+
Sbjct: 140 ISPYSPQFPQNNLERKIQIRRMLQVQGSL-RVHTFSSAAIVHAVETSD 186


>02_04_0451 +
           23021139-23021269,23021366-23021498,23021594-23021789,
           23023376-23023737,23024049-23024363
          Length = 378

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
 Frame = +1

Query: 421 LHQLRTAMHHHP--PNQERAVNLSILPVSGPGEISRVESN*AAGSTPGGALPSIPLSFSF 594
           LH L T     P  P +  +   +ILP   PG  S + S    G TP G +   P  F F
Sbjct: 313 LHYLSTLSPPEPLAPPRTFSSENAILPPESPGTSSLMASRGDLGDTPKGKMEDKPRGFFF 372


>01_07_0306 + 42638683-42638990,42639074-42639314,42639935-42640236,
            42640431-42640607,42640853-42641617,42641697-42641791,
            42641889-42641951,42642047-42642135,42642229-42642324,
            42642457-42643104,42643596-42643628,42643838-42643912,
            42644442-42644603,42644604-42644674,42644758-42644815,
            42645196-42645394,42645487-42645552,42645699-42646183
          Length = 1310

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = +1

Query: 109  PRLWGIIANPNPQHEGVSAGCPGL*ARXEHADSFSVARV-RPRTSKGITDXXXXXXXXXE 285
            P LW +++ P P+++ +  G PG       AD   + ++ R   S+G T          +
Sbjct: 1110 PFLWNVLSAPLPKNDAIDGGLPG------SADRPKLLKLDRSPLSQGTTKWKKSDRERDQ 1163

Query: 286  DAGPSKKNFNTSS 324
            +   S KN N+ S
Sbjct: 1164 NRDASLKNSNSKS 1176


>10_01_0085 +
           1061962-1062141,1062283-1062431,1062734-1062819,
           1062986-1063113,1063213-1063341,1063428-1063495,
           1063575-1063812
          Length = 325

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -1

Query: 184 PRGPGNPLKLLRAGDWGLQLSPINEEFLVSASHKLALITSLPFV 53
           P   G PL+LL  GDWG +    N+  +     K+A  T + FV
Sbjct: 31  PVAAGAPLRLLVVGDWG-RKGGYNQTRVAEQMGKVAEETEIDFV 73


>07_01_0130 - 963856-965454
          Length = 532

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 424 HQLRTAMHHHPPNQERAVNLSILPVSGPGEISR 522
           H +   +   PPN     NL +LP+ GP ++ +
Sbjct: 195 HIINFLLRPEPPNTLSVDNLGVLPIIGPAKVGK 227


>02_05_1011 +
           33487670-33487958,33490794-33492100,33492541-33492853,
           33493190-33494247
          Length = 988

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 176 PGQPAETPSCWGLGFAIIPHKRGIPSKR 93
           PG+P +TP  W +  + +P +  +P+KR
Sbjct: 443 PGEPRDTPRGWTVSPSGLPLRVSVPTKR 470


>03_06_0189 + 32214702-32215154
          Length = 150

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 538 AAGSTPGGALPSIPLSFSFATILPPESKIFGFPEA 642
           AA + P  ALP +P   +  T LPP   I   P+A
Sbjct: 30  AAAAAPPAALPVLPAVPALPTTLPPMPAIPAVPQA 64


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,547,299
Number of Sequences: 37544
Number of extensions: 542239
Number of successful extensions: 1235
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)