Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_F02
(820 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 141 7e-34
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 134 1e-31
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663... 29 3.4
12_01_0260 + 1915039-1915141,1915241-1915332,1915430-1915507,191... 29 4.4
11_01_0262 + 1996268-1996370,1996470-1996561,1996681-1996758,199... 29 4.4
11_01_0710 - 5830475-5830595,5831498-5834124 28 7.8
08_01_0332 + 2971361-2971439,2971596-2971783,2971985-2972062,297... 28 7.8
01_05_0308 + 20710454-20710570,20710917-20710999,20711114-207112... 28 7.8
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 141 bits (341), Expect = 7e-34
Identities = 63/91 (69%), Positives = 73/91 (80%)
Frame = -2
Query: 387 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEK 208
A TE+D +EK ITPMGGFPHYG V D++MIKGCC+GPKKR++TLR+SL T R ALE+
Sbjct: 298 ACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
Query: 207 INLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
I LKFIDTSSKFGHGRFQT +K F G LK
Sbjct: 358 IKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388
Score = 91.1 bits (216), Expect = 1e-18
Identities = 40/61 (65%), Positives = 47/61 (77%)
Frame = -1
Query: 628 KXKGYKGVTSRWHTKEATPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNQ 449
K KGY+GV +RW H + LRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMN+
Sbjct: 225 KGKGYEGVVTRWGVTRLPRKTH-RGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNK 283
Query: 448 E 446
+
Sbjct: 284 K 284
Score = 59.7 bits (138), Expect = 3e-09
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = -3
Query: 776 KRRFTLWKSXLTGGTVEDKVKWXREHFGEPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFS 597
+++ L + + GGT+ DKV + + F + IPVD+VF +DEMID IGVT+G+ +
Sbjct: 176 QKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTR 235
Query: 596 LAHQRSYPRKTHQG 555
R PRKTH+G
Sbjct: 236 WGVTR-LPRKTHRG 248
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 134 bits (323), Expect = 1e-31
Identities = 59/83 (71%), Positives = 69/83 (83%)
Frame = -2
Query: 387 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEK 208
A TE+D +EK ITPMGGFPHYG V D++MIKGCC+GPKKR++TLR+SL T R ALE+
Sbjct: 298 ACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
Query: 207 INLKFIDTSSKFGHGRFQTPADK 139
I LKFIDTSSKFGHGRFQT +K
Sbjct: 358 IKLKFIDTSSKFGHGRFQTTDEK 380
Score = 91.1 bits (216), Expect = 1e-18
Identities = 40/61 (65%), Positives = 47/61 (77%)
Frame = -1
Query: 628 KXKGYKGVTSRWHTKEATPVRHTKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNQ 449
K KGY+GV +RW H + LRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMN+
Sbjct: 225 KGKGYEGVVTRWGVTRLPRKTH-RGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNK 283
Query: 448 E 446
+
Sbjct: 284 K 284
Score = 59.7 bits (138), Expect = 3e-09
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = -3
Query: 776 KRRFTLWKSXLTGGTVEDKVKWXREHFGEPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFS 597
+++ L + + GGT+ DKV + + F + IPVD+VF +DEMID IGVT+G+ +
Sbjct: 176 QKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTR 235
Query: 596 LAHQRSYPRKTHQG 555
R PRKTH+G
Sbjct: 236 WGVTR-LPRKTHRG 248
>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
30366541-30366849,30367544-30370567,30370640-30372290,
30372373-30373463,30373544-30373646,30373737-30374439,
30374654-30375783,30375913-30376027,30376504-30376695,
30377443-30377616,30378438-30378494,30378581-30378716,
30378842-30378927,30379023-30379092,30379993-30380021,
30380444-30380456,30380762-30381006
Length = 3582
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 372 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 277
D + + +P+GG P YG ++ D + C +G
Sbjct: 1371 DPTSAAASPIGGIPRYGRLSGDVYVCNQCTIG 1402
>12_01_0260 +
1915039-1915141,1915241-1915332,1915430-1915507,
1915623-1915697
Length = 115
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 373 ILSRCIVFNNFAILFVDSLSNTIDFLGSFQYGDDNLSDQHELQ 501
++ R + ++F + VDS S ++FLG + D +S Q + Q
Sbjct: 23 LIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQ 65
>11_01_0262 +
1996268-1996370,1996470-1996561,1996681-1996758,
1996874-1996948
Length = 115
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 373 ILSRCIVFNNFAILFVDSLSNTIDFLGSFQYGDDNLSDQHELQ 501
++ R + ++F + VDS S ++FLG + D +S Q + Q
Sbjct: 23 LIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQ 65
>11_01_0710 - 5830475-5830595,5831498-5834124
Length = 915
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 643 QSIISSWANTESTGIGSPKCSLXHFTLSSTVPPV 744
+S+ISSW + TG S CS+ + + P+
Sbjct: 650 ESVISSWGGSVHTGTSSSSCSVTNLVVKFCTLPL 683
>08_01_0332 +
2971361-2971439,2971596-2971783,2971985-2972062,
2972354-2972425,2972513-2972631,2972858-2972942,
2973096-2973185,2973268-2973369,2973448-2973624,
2973874-2973954,2974511-2974582,2974662-2974756,
2974831-2974919,2975016-2975078,2975161-2975204,
2975554-2975685
Length = 521
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 1 FFFFFFALSNVYFHGLHLRL 60
FFFFFF +N+ FH L+ L
Sbjct: 307 FFFFFFFCANILFHHLNYLL 326
>01_05_0308 +
20710454-20710570,20710917-20710999,20711114-20711264,
20711369-20711468,20711592-20711684,20711891-20711939,
20712024-20712121,20712300-20712406,20712498-20712671
Length = 323
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 391 VFNNFAILFVDSLSNTIDFLGSFQYGDDNLSDQ 489
V NN V +L NT+D LGS + +L DQ
Sbjct: 68 VMNNLKEYSVKALVNTVDHLGSISFKVSSLIDQ 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,768,876
Number of Sequences: 37544
Number of extensions: 494809
Number of successful extensions: 1282
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1278
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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