Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_E12
(764 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0157 - 32039020-32039175,32039267-32039338,32039478-320396... 35 0.062
12_01_0366 + 2779754-2779882,2780007-2780047,2780163-2780212,278... 30 2.3
03_06_0771 - 36152554-36153215,36153320-36153818,36153924-36153956 30 2.3
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 29 3.1
08_02_1309 - 26029691-26030609,26030850-26030925,26032198-26032579 29 4.1
07_01_1085 + 9890369-9892114,9892213-9892731 29 4.1
07_01_1076 + 9649003-9650226,9653318-9653743,9653853-9654371 29 4.1
04_04_0415 + 25038826-25038835,25039333-25039964,25040484-250405... 29 4.1
09_03_0040 + 11816056-11819069,11819837-11820428 29 5.4
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899... 28 7.1
05_01_0470 - 3747783-3748097,3749433-3750305 28 7.1
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293... 28 7.1
02_01_0144 - 1038547-1039650 28 7.1
01_01_0403 - 3051317-3052120 28 7.1
08_01_0812 + 7886057-7886872,7887115-7887702 28 9.4
03_05_0071 - 20491521-20492813 28 9.4
01_06_0248 + 27862048-27864310,27864331-27864776 28 9.4
01_06_0115 + 26585481-26586401,26586501-26586556,26586747-265868... 28 9.4
>03_06_0157 - 32039020-32039175,32039267-32039338,32039478-32039602,
32039678-32040559,32040623-32040692,32041248-32041739,
32041985-32042044,32042541-32042618,32043322-32044344
Length = 985
Score = 35.1 bits (77), Expect = 0.062
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Frame = -3
Query: 720 NVNTIEMKESPERTSKKKSRSPSGAKFNYVYYDPEMHWCRVCNDFPPTAKDYLNHXHSPA 541
NV+T ++SP +++KKK + G +PE + D P + D NH +P
Sbjct: 847 NVDTRRQQQSPLQSNKKK-KGRQGLP------EPEEAEVPLRVDPPTISNDIPNHLRTPT 899
Query: 540 HHKMASAH-MEAPW----HGVSAHEGFP 472
+A++H M+AP+ G+S+ +GFP
Sbjct: 900 SQFLATSHIMQAPYIAQQFGLSSLQGFP 927
>12_01_0366 +
2779754-2779882,2780007-2780047,2780163-2780212,
2780824-2780968,2781298-2781354,2781448-2781571,
2781798-2782259,2782493-2782564
Length = 359
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 549 SPAHHKMASAHMEAPWHGVSAHEGFPPNPAAPTKRTPI 436
SP H A AH A HG + PP P P TP+
Sbjct: 279 SPFHPTSADAHRPAYGHGTPLLQPLPP-PTPPASLTPV 315
>03_06_0771 - 36152554-36153215,36153320-36153818,36153924-36153956
Length = 397
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = -3
Query: 627 YDPEMHWCRVCNDFPPTAKDYLNHXHSPAHHKMASAHMEAPWHGVSAHEGFPPNPAAPTK 448
+ PE R+ +PP Y ++ H HH+ AH A + H PP P P
Sbjct: 309 FPPEEMMKRMHLYWPPYGHGYTSYYHHHHHHQGGQAHPCA-----NLHSWVPPPPPPPPP 363
Query: 447 RTPI 436
P+
Sbjct: 364 PPPV 367
>12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 624 DPEMHWCRVCNDFPPTAKDYLNHXHSPAHHKMA 526
D ++ WCR+CN T ++ H + HH+ A
Sbjct: 1100 DGDVSWCRICNISCGTVENLNIHVETREHHQHA 1132
>08_02_1309 - 26029691-26030609,26030850-26030925,26032198-26032579
Length = 458
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +1
Query: 346 MGRRAVQVSYELIAQLAVPGRGGHEEL*SLDRCPLGGRGGVGREALVGG 492
MGRRA +++ +V G GG E D P G G GR A GG
Sbjct: 363 MGRRAGSGNHQAGKLASVRGEGGGGEADEQDGEPTSGTGRGGRRAGWGG 411
>07_01_1085 + 9890369-9892114,9892213-9892731
Length = 754
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 288 WETDWMSDRQKAFETTRGKLKAELTDKCVYTAQTITFSKDGFHS 157
W T SD+ + F T + K+K L K + +QT F H+
Sbjct: 48 WATALSSDQFRGFHTAKNKIK-PLPPKLFFVSQTAGFGSTSVHT 90
>07_01_1076 + 9649003-9650226,9653318-9653743,9653853-9654371
Length = 722
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 288 WETDWMSDRQKAFETTRGKLKAELTDKCVYTAQTITFSKDGFHS 157
W T SD+ + F T + K+K L K + +QT F H+
Sbjct: 48 WATALSSDQFRGFHTAKNKIK-PLPPKLFFVSQTAGFGSTSVHA 90
>04_04_0415 +
25038826-25038835,25039333-25039964,25040484-25040561,
25040588-25040833,25041598-25041684,25041860-25042024
Length = 405
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -2
Query: 304 RTKSPLGNGLDVRPTESLRDDPRQAEGGAHRQVRVHGADHHLQQGRLPL 158
R+K +G G DVRP L +GG R++ +GA +L + L L
Sbjct: 115 RSKKIVGGGTDVRPVYGLEFVHGGYDGGRSRELAGNGASAYLCEDVLGL 163
>09_03_0040 + 11816056-11819069,11819837-11820428
Length = 1201
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 322 LGVHNGFEMGRRAVQVSYELIAQLAVPGRGGHEEL*SLDRCPLGGRGG--VGREA 480
+G+H ++ G + +V+ L+A V G H+EL S D G GG +G +A
Sbjct: 758 VGLHRPYQGGIDSTKVNGILVAISIVASGGYHDELSSSDELIYTGSGGKAIGNKA 812
>05_05_0155 +
22787658-22787930,22788029-22788096,22789600-22789915,
22790207-22790323
Length = 257
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 8/93 (8%)
Frame = -3
Query: 639 NYVYYDPEMHWCRVCNDFPPTAKDYLNHXHSPAHHKMASAHMEAPWHGVSAHEGFP---- 472
++++ P H R + PP + H H P HH H P H H P
Sbjct: 21 SHIFAPPPPH-LRHPHHHPPHHHPHPPHHHPP-HHPHPPHHPHPPHHPHPPHHPHPPHHH 78
Query: 471 ----PNPAAPTKRTPIKGLQFFVPSTAWYCKLC 385
P+PAA + + G + +C C
Sbjct: 79 PHPHPDPAAEAIQANVDGAGYGTTVELQFCASC 111
>05_01_0470 - 3747783-3748097,3749433-3750305
Length = 395
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3
Query: 528 ASAHMEAPWHGVSAHEGFPPNPAAPT 451
AS+H+EA H A EG P P PT
Sbjct: 126 ASSHLEAHGHHQHAEEGESPPPPPPT 151
>04_04_1104 -
30928475-30928501,30929008-30929110,30929287-30929340,
30929803-30929895,30930063-30930140,30930416-30930527,
30930618-30930756,30930823-30930910,30930984-30931079,
30931675-30931781,30931874-30932009,30932089-30932186,
30932954-30933047,30933132-30933301,30933749-30933819,
30936066-30936194,30936552-30936654,30936764-30936907,
30937123-30937245,30937482-30937563,30939044-30939120,
30939261-30939315,30939365-30939443,30939544-30939620,
30939739-30939869,30939947-30940120,30940245-30940310,
30940937-30941572
Length = 1113
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -3
Query: 660 SPSGAKFNYVYYDPEMHWCRVCNDFPPTAKDYLNHXHSPAHHKMASAHMEAPWHGV 493
SPS + D E H C++CN K L H + H + + PW GV
Sbjct: 624 SPSESDHGSTESDEEFHMCQICN--TEEEKTLLLHCSGCSRH-VHPGCLTPPWTGV 676
>02_01_0144 - 1038547-1039650
Length = 367
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 552 HSPAHHKMASAHMEAPWHGVSAHEGFPPNPAAPT-KRTPIKGLQFFVPSTA 403
H+ K+ A + P H ++ PP P+ P ++TP K + P+TA
Sbjct: 6 HAMRAAKLPLAVLAKPTHASASQPPAPPRPSNPRHRKTPAKASKTPAPATA 56
>01_01_0403 - 3051317-3052120
Length = 267
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 622 PRDALVPRVQRLPAHRQGLPQPXALSRAPQDGVGP 518
PR L P + P R P P +++ P+D GP
Sbjct: 8 PRLTLTPTPRANPGRRSARPTPASITCGPRDNRGP 42
>08_01_0812 + 7886057-7886872,7887115-7887702
Length = 467
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 549 SPAHHKMASAHMEAPWHGVSAHEGFPPNPAA 457
SPA ++S+ M +PW G S P PAA
Sbjct: 50 SPAPSTLSSSCMSSPWGGGSGRWSASPAPAA 80
>03_05_0071 - 20491521-20492813
Length = 430
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = -3
Query: 465 PAAPTKRTPIKGLQFFVPSTAWYCKLCDQFIGDLHCASAHLKSIVHSKNYANF 307
P A R KGLQ WYC++C + D + H S H + F
Sbjct: 9 PKAIANRIKAKGLQ----KLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQVF 57
>01_06_0248 + 27862048-27864310,27864331-27864776
Length = 902
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 215 VSSAFSLPRVVSKAFCRSDIQSVSQW 292
+ F LP++VS AF S + ++S W
Sbjct: 784 ILDGFLLPQIVSNAFSASRVNAISPW 809
>01_06_0115 +
26585481-26586401,26586501-26586556,26586747-26586876,
26587396-26587506,26587606-26587674,26588125-26588198,
26588446-26588581,26588702-26588795,26588901-26589000,
26589100-26589224,26589597-26589634,26589662-26589742,
26589868-26589972,26590102-26590166,26590371-26590572,
26591073-26591159,26591238-26591294,26591369-26591458,
26591572-26591658,26592204-26592278,26592363-26592463,
26592565-26592655
Length = 964
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 406 RGGHEEL*SLDRCPLGGRGGVGREALVGGDAVP 504
R E+ SL RC GG GVG + GG+ P
Sbjct: 5 RNQRSEILSLRRCNAGGGAGVGEDDGDGGERRP 37
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,025,583
Number of Sequences: 37544
Number of extensions: 401072
Number of successful extensions: 1416
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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