Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_E08
(779 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D. m... 34 0.19
X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR... 34 0.19
M20316-1|AAA28311.1| 521|Drosophila melanogaster protein ( D.me... 34 0.19
AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA... 34 0.19
BT010035-1|AAQ22504.1| 1596|Drosophila melanogaster LD47819p pro... 31 1.8
AE014298-2938|AAN09519.1| 1596|Drosophila melanogaster CG12701-P... 31 1.8
AE014298-2937|AAF49020.1| 1596|Drosophila melanogaster CG12701-P... 31 1.8
AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro... 30 4.1
AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA... 30 4.1
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB... 30 4.1
X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subuni... 29 5.4
X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic acet... 29 5.4
AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p pro... 29 5.4
AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB... 29 5.4
AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA... 29 5.4
AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic ac... 29 7.2
AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic ac... 29 7.2
AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic ac... 29 7.2
AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic ac... 29 7.2
X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta su... 29 9.5
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 29 9.5
BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p pro... 29 9.5
AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p pro... 29 9.5
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 29 9.5
AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic ac... 29 9.5
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 29 9.5
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 29 9.5
AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB... 29 9.5
AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA... 29 9.5
>X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D.
melanogaster ardgene exons 1-2 (fragment Xba-IN2 of
gARD5) for nicotinicacetylcholine receptor. ).
Length = 521
Score = 34.3 bits (75), Expect = 0.19
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = -3
Query: 750 WPNDXQTCTFKFGSGMHNSDEMDFVI--DKRIYSM---FESGAWDVTDL 619
+P D QTC KFGS N D++ + +K + ++SG WD+ ++
Sbjct: 159 FPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIIEV 207
>X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR
protein.
Length = 521
Score = 34.3 bits (75), Expect = 0.19
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = -3
Query: 750 WPNDXQTCTFKFGSGMHNSDEMDFVI--DKRIYSM---FESGAWDVTDL 619
+P D QTC KFGS N D++ + +K + ++SG WD+ ++
Sbjct: 159 FPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIIEV 207
>M20316-1|AAA28311.1| 521|Drosophila melanogaster protein (
D.melanogaster acetylcholinereceptor-related protein
mRNA, complete cds. ).
Length = 521
Score = 34.3 bits (75), Expect = 0.19
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = -3
Query: 750 WPNDXQTCTFKFGSGMHNSDEMDFVI--DKRIYSM---FESGAWDVTDL 619
+P D QTC KFGS N D++ + +K + ++SG WD+ ++
Sbjct: 159 FPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIIEV 207
>AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA,
isoform A protein.
Length = 521
Score = 34.3 bits (75), Expect = 0.19
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = -3
Query: 750 WPNDXQTCTFKFGSGMHNSDEMDFVI--DKRIYSM---FESGAWDVTDL 619
+P D QTC KFGS N D++ + +K + ++SG WD+ ++
Sbjct: 159 FPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIIEV 207
>BT010035-1|AAQ22504.1| 1596|Drosophila melanogaster LD47819p
protein.
Length = 1596
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -3
Query: 402 SVSSRLGEAGSAPRVSCVQAAAARHPRRSGASSPTS 295
+ SS EAGSAP A A PR +SSPTS
Sbjct: 216 TASSAQEEAGSAPSAVSTTTAVAMSPRVVSSSSPTS 251
>AE014298-2938|AAN09519.1| 1596|Drosophila melanogaster CG12701-PB,
isoform B protein.
Length = 1596
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -3
Query: 402 SVSSRLGEAGSAPRVSCVQAAAARHPRRSGASSPTS 295
+ SS EAGSAP A A PR +SSPTS
Sbjct: 216 TASSAQEEAGSAPSAVSTTTAVAMSPRVVSSSSPTS 251
>AE014298-2937|AAF49020.1| 1596|Drosophila melanogaster CG12701-PA,
isoform A protein.
Length = 1596
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -3
Query: 402 SVSSRLGEAGSAPRVSCVQAAAARHPRRSGASSPTS 295
+ SS EAGSAP A A PR +SSPTS
Sbjct: 216 TASSAQEEAGSAPSAVSTTTAVAMSPRVVSSSSPTS 251
>AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p
protein.
Length = 1458
Score = 29.9 bits (64), Expect = 4.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 228 HAPHHALCSHDHSGSGVRSQVLERLEMR 311
H PHH H H+G+G Q E+L+++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 690
>AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA,
isoform A protein.
Length = 1458
Score = 29.9 bits (64), Expect = 4.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 228 HAPHHALCSHDHSGSGVRSQVLERLEMR 311
H PHH H H+G+G Q E+L+++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 690
>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
isoform B protein.
Length = 1740
Score = 29.9 bits (64), Expect = 4.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 228 HAPHHALCSHDHSGSGVRSQVLERLEMR 311
H PHH H H+G+G Q E+L+++
Sbjct: 945 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 972
>X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subunit
nicotinic acetylcholinereceptor precursor protein.
Length = 576
Score = 29.5 bits (63), Expect = 5.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 750 WPNDXQTCTFKFGSGMHNSDEMD 682
+P D QTC KFGS ++ D++D
Sbjct: 176 FPFDQQTCFMKFGSWTYDGDQID 198
>X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic
acetylcholine receptoralpha subunit protein.
Length = 576
Score = 29.5 bits (63), Expect = 5.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 750 WPNDXQTCTFKFGSGMHNSDEMD 682
+P D QTC KFGS ++ D++D
Sbjct: 176 FPFDQQTCFMKFGSWTYDGDQID 198
>AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p
protein.
Length = 576
Score = 29.5 bits (63), Expect = 5.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 750 WPNDXQTCTFKFGSGMHNSDEMD 682
+P D QTC KFGS ++ D++D
Sbjct: 176 FPFDQQTCFMKFGSWTYDGDQID 198
>AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB,
isoform B protein.
Length = 576
Score = 29.5 bits (63), Expect = 5.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 750 WPNDXQTCTFKFGSGMHNSDEMD 682
+P D QTC KFGS ++ D++D
Sbjct: 176 FPFDQQTCFMKFGSWTYDGDQID 198
>AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA,
isoform A protein.
Length = 576
Score = 29.5 bits (63), Expect = 5.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 750 WPNDXQTCTFKFGSGMHNSDEMD 682
+P D QTC KFGS ++ D++D
Sbjct: 176 FPFDQQTCFMKFGSWTYDGDQID 198
>AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type V
protein.
Length = 523
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 765 MQLDNWPNDXQTCTFKFGSGMHNSDEMDFVID 670
M + +P D Q C KFGS ++ +++D V++
Sbjct: 156 MDITWFPFDDQHCEMKFGSWTYDGNQLDLVLN 187
>AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type IV
protein.
Length = 509
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 765 MQLDNWPNDXQTCTFKFGSGMHNSDEMDFVID 670
M + +P D Q C KFGS ++ +++D V++
Sbjct: 171 MDITWFPFDDQHCEMKFGSWTYDGNQLDLVLN 202
>AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type III
protein.
Length = 494
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 765 MQLDNWPNDXQTCTFKFGSGMHNSDEMDFVID 670
M + +P D Q C KFGS ++ +++D V++
Sbjct: 156 MDITWFPFDDQHCEMKFGSWTYDGNQLDLVLN 187
>AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type II
protein.
Length = 494
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 765 MQLDNWPNDXQTCTFKFGSGMHNSDEMDFVID 670
M + +P D Q C KFGS ++ +++D V++
Sbjct: 156 MDITWFPFDDQHCEMKFGSWTYDGNQLDLVLN 187
>X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta
subunit of nicotinicacetylcholine receptor protein.
Length = 500
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 765 MQLDNWPNDXQTCTFKFGSGMHNSDEMD 682
M ++ +P D Q C KFGS +N ++D
Sbjct: 137 MNVEYFPYDEQICFMKFGSWTYNGAQVD 164
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 750 WPNDXQTCTFKFGSGMHNSDEMDFVIDKR----IYSMFESGAWDV 628
+P D Q C KFGS ++ ++D + I S +G WD+
Sbjct: 192 FPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 236
>BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p
protein.
Length = 508
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 765 MQLDNWPNDXQTCTFKFGSGMHNSDEMDFVI 673
M + +P D Q C KFGS ++ +++D V+
Sbjct: 170 MDITWFPFDDQHCEMKFGSWTYDGNQLDLVL 200
>AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p
protein.
Length = 238
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 765 MQLDNWPNDXQTCTFKFGSGMHNSDEMD 682
M ++ +P D Q C KFGS +N ++D
Sbjct: 156 MNVEYFPYDEQICFMKFGSWTYNGAQVD 183
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 750 WPNDXQTCTFKFGSGMHNSDEMDFVIDKR----IYSMFESGAWDV 628
+P D Q C KFGS ++ ++D + I S +G WD+
Sbjct: 170 FPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 214
>AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha6 protein.
Length = 494
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 765 MQLDNWPNDXQTCTFKFGSGMHNSDEMDFVI 673
M + +P D Q C KFGS ++ +++D V+
Sbjct: 156 MDITWFPFDDQHCEMKFGSWTYDGNQLDLVL 186
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 750 WPNDXQTCTFKFGSGMHNSDEMDFVIDKR----IYSMFESGAWDV 628
+P D Q C KFGS ++ ++D + I S +G WD+
Sbjct: 192 FPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 236
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 750 WPNDXQTCTFKFGSGMHNSDEMDFVIDKR----IYSMFESGAWDV 628
+P D Q C KFGS ++ ++D + I S +G WD+
Sbjct: 173 FPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 217
>AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB,
isoform B protein.
Length = 304
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 765 MQLDNWPNDXQTCTFKFGSGMHNSDEMD 682
M ++ +P D Q C KFGS +N ++D
Sbjct: 156 MNVEYFPYDEQICFMKFGSWTYNGAQVD 183
>AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA,
isoform A protein.
Length = 519
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 765 MQLDNWPNDXQTCTFKFGSGMHNSDEMD 682
M ++ +P D Q C KFGS +N ++D
Sbjct: 156 MNVEYFPYDEQICFMKFGSWTYNGAQVD 183
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,012,588
Number of Sequences: 53049
Number of extensions: 479195
Number of successful extensions: 1817
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1815
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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