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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_D12
         (742 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    35   0.070
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    35   0.070
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    35   0.070
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    33   0.21 
AF000298-11|AAM97960.1|  518|Caenorhabditis elegans Prion-like-(...    33   0.28 
AF000298-10|AAM97961.1|  539|Caenorhabditis elegans Prion-like-(...    33   0.28 
AF000298-8|AAC48255.2|  524|Caenorhabditis elegans Prion-like-(q...    33   0.28 
U39666-1|AAA80412.2|  644|Caenorhabditis elegans Nematode astaci...    31   0.65 
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA bi...    30   2.0  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    29   3.5  
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    29   3.5  
U23172-13|ABH03527.1|  282|Caenorhabditis elegans Hypothetical p...    29   3.5  
U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical p...    29   3.5  
AL117204-20|CAB55136.2|  699|Caenorhabditis elegans Hypothetical...    28   8.0  
AJ243905-1|CAB64866.1|  699|Caenorhabditis elegans SF1 protein p...    28   8.0  

>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 34.7 bits (76), Expect = 0.070
 Identities = 19/39 (48%), Positives = 20/39 (51%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           PPP GG    P    GGPPPP P G     +  GGP PP
Sbjct: 729 PPPPGGL---PPIT-GGPPPPPPPGGLPPIS--GGPPPP 761



 Score = 33.9 bits (74), Expect = 0.12
 Identities = 18/41 (43%), Positives = 19/41 (46%)
 Frame = -2

Query: 348 GXPPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           G PPP  G    P    G PPPP P G      + GGP PP
Sbjct: 711 GGPPPPPGL---PPITGGPPPPPPPGGLPP---ITGGPPPP 745



 Score = 31.1 bits (67), Expect = 0.86
 Identities = 17/41 (41%), Positives = 17/41 (41%)
 Frame = -2

Query: 348 GXPPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           G PP  GG    P    G PPPP P          GGP PP
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPP---PPPGGFKGGPPPP 787


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 34.7 bits (76), Expect = 0.070
 Identities = 19/39 (48%), Positives = 20/39 (51%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           PPP GG    P    GGPPPP P G     +  GGP PP
Sbjct: 729 PPPPGGL---PPIT-GGPPPPPPPGGLPPIS--GGPPPP 761



 Score = 33.9 bits (74), Expect = 0.12
 Identities = 18/41 (43%), Positives = 19/41 (46%)
 Frame = -2

Query: 348 GXPPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           G PPP  G    P    G PPPP P G      + GGP PP
Sbjct: 711 GGPPPPPGL---PPITGGPPPPPPPGGLPP---ITGGPPPP 745



 Score = 31.1 bits (67), Expect = 0.86
 Identities = 17/41 (41%), Positives = 17/41 (41%)
 Frame = -2

Query: 348 GXPPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           G PP  GG    P    G PPPP P          GGP PP
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPP---PPPGGFKGGPPPP 787


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 34.7 bits (76), Expect = 0.070
 Identities = 19/39 (48%), Positives = 20/39 (51%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           PPP GG    P    GGPPPP P G     +  GGP PP
Sbjct: 312 PPPPGGL---PPIT-GGPPPPPPPGGLPPIS--GGPPPP 344



 Score = 33.9 bits (74), Expect = 0.12
 Identities = 18/41 (43%), Positives = 19/41 (46%)
 Frame = -2

Query: 348 GXPPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           G PPP  G    P    G PPPP P G      + GGP PP
Sbjct: 294 GGPPPPPGL---PPITGGPPPPPPPGGLPP---ITGGPPPP 328



 Score = 31.1 bits (67), Expect = 0.86
 Identities = 17/41 (41%), Positives = 17/41 (41%)
 Frame = -2

Query: 348 GXPPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           G PP  GG    P    G PPPP P          GGP PP
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPP---PPPGGFKGGPPPP 370


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGG--PPPPXPXGXXXKXALWGGPSPP 226
           PP  GG    P    GG  PPPP   G      ++G P PP
Sbjct: 77  PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPP 117



 Score = 28.3 bits (60), Expect = 6.0
 Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXP---XGXXXKXALWGG--PSPPXF 220
           PPP       P    GG PPP P    G      + GG  P PP F
Sbjct: 66  PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF 111


>AF000298-11|AAM97960.1|  518|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform b protein.
          Length = 518

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 15/41 (36%), Positives = 15/41 (36%)
 Frame = -2

Query: 348 GXPPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           G PPP      SP     G PPP P          G P PP
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 275



 Score = 32.3 bits (70), Expect = 0.37
 Identities = 16/41 (39%), Positives = 16/41 (39%)
 Frame = -2

Query: 348 GXPPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           G PPP       P    G PPPP P G        G P PP
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPP-PTGSPPPPPAGGSPPPP 292



 Score = 30.3 bits (65), Expect = 1.5
 Identities = 21/82 (25%), Positives = 21/82 (25%), Gaps = 2/82 (2%)
 Frame = +2

Query: 230 GEGPPQRAFFXXKPXGXGGGGPPXXKXGEKXXPPXGGGXPXXXXXXXKKXPPXXKKKXRX 409
           G G P        P     G PP    G    PP GG  P          PP        
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 310

Query: 410 KTXRXLXXXXTP--GXSXPPPP 469
                      P  G   PPPP
Sbjct: 311 SLPPPQAGGSPPPAGTGSPPPP 332



 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/39 (41%), Positives = 16/39 (41%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           PPP  G   SP     G PPP P G        G P PP
Sbjct: 265 PPPRTG---SPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300



 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXPXGXXXKXAL---WGGPSPP 226
           PPP  G    P      PPPP P G     +L     G SPP
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 322



 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/39 (33%), Positives = 13/39 (33%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           PPP       P    G PPPP   G          P PP
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 276


>AF000298-10|AAM97961.1|  539|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform c protein.
          Length = 539

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 15/41 (36%), Positives = 15/41 (36%)
 Frame = -2

Query: 348 GXPPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           G PPP      SP     G PPP P          G P PP
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 296



 Score = 32.3 bits (70), Expect = 0.37
 Identities = 16/41 (39%), Positives = 16/41 (39%)
 Frame = -2

Query: 348 GXPPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           G PPP       P    G PPPP P G        G P PP
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPP-PTGSPPPPPAGGSPPPP 313



 Score = 30.3 bits (65), Expect = 1.5
 Identities = 21/82 (25%), Positives = 21/82 (25%), Gaps = 2/82 (2%)
 Frame = +2

Query: 230 GEGPPQRAFFXXKPXGXGGGGPPXXKXGEKXXPPXGGGXPXXXXXXXKKXPPXXKKKXRX 409
           G G P        P     G PP    G    PP GG  P          PP        
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 331

Query: 410 KTXRXLXXXXTP--GXSXPPPP 469
                      P  G   PPPP
Sbjct: 332 SLPPPQAGGSPPPAGTGSPPPP 353



 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/39 (41%), Positives = 16/39 (41%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           PPP  G   SP     G PPP P G        G P PP
Sbjct: 286 PPPRTG---SPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321



 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXPXGXXXKXAL---WGGPSPP 226
           PPP  G    P      PPPP P G     +L     G SPP
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 343



 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/39 (33%), Positives = 13/39 (33%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           PPP       P    G PPPP   G          P PP
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 297


>AF000298-8|AAC48255.2|  524|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform a protein.
          Length = 524

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 15/41 (36%), Positives = 15/41 (36%)
 Frame = -2

Query: 348 GXPPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           G PPP      SP     G PPP P          G P PP
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 281



 Score = 32.3 bits (70), Expect = 0.37
 Identities = 16/41 (39%), Positives = 16/41 (39%)
 Frame = -2

Query: 348 GXPPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           G PPP       P    G PPPP P G        G P PP
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPP-PTGSPPPPPAGGSPPPP 298



 Score = 30.3 bits (65), Expect = 1.5
 Identities = 21/82 (25%), Positives = 21/82 (25%), Gaps = 2/82 (2%)
 Frame = +2

Query: 230 GEGPPQRAFFXXKPXGXGGGGPPXXKXGEKXXPPXGGGXPXXXXXXXKKXPPXXKKKXRX 409
           G G P        P     G PP    G    PP GG  P          PP        
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 316

Query: 410 KTXRXLXXXXTP--GXSXPPPP 469
                      P  G   PPPP
Sbjct: 317 SLPPPQAGGSPPPAGTGSPPPP 338



 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/39 (41%), Positives = 16/39 (41%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           PPP  G   SP     G PPP P G        G P PP
Sbjct: 271 PPPRTG---SPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306



 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXPXGXXXKXAL---WGGPSPP 226
           PPP  G    P      PPPP P G     +L     G SPP
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 328



 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/39 (33%), Positives = 13/39 (33%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           PPP       P    G PPPP   G          P PP
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 282


>U39666-1|AAA80412.2|  644|Caenorhabditis elegans Nematode astacin
           protease protein33 protein.
          Length = 644

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
 Frame = -2

Query: 378 FFFXXXXXXXGXPPPX----GGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           +FF       G PPP     G   F P      PPPP       +   WG P PP
Sbjct: 29  WFFPGPLRPWGPPPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPP 83


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = -2

Query: 348  GXPPPXGGXXFS-PXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
            G PPP GG     P    GGPPP             GGP PP
Sbjct: 1572 GPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPPP 1613



 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/41 (34%), Positives = 15/41 (36%)
 Frame = +2

Query: 227  GGEGPPQRAFFXXKPXGXGGGGPPXXKXGEKXXPPXGGGXP 349
            GG  PP+       P    GG PP         PP  GG P
Sbjct: 1571 GGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPP 1611


>Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical
           protein C08B11.5 protein.
          Length = 388

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/43 (37%), Positives = 18/43 (41%)
 Frame = -2

Query: 348 GXPPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPPXF 220
           G PPP     F P    GG PPP P G      +   P PP +
Sbjct: 315 GMPPPPPPSRFGPP-GMGGMPPPPPPGMRYPGGM-PPPPPPRY 355



 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           PPP  G    P    G PPPP P        + G P PP
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPP-PPSRFGPPGMGGMPPPP 337


>U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA
           binding protein protein.
          Length = 398

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/43 (37%), Positives = 18/43 (41%)
 Frame = -2

Query: 348 GXPPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPPXF 220
           G PPP     F P    GG PPP P G      +   P PP +
Sbjct: 325 GMPPPPPPSRFGPP-GMGGMPPPPPPGMRYPGGM-PPPPPPRY 365



 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           PPP  G    P    G PPPP P        + G P PP
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPP-PPSRFGPPGMGGMPPPP 347


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/39 (33%), Positives = 14/39 (35%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           PPP      +P      PPPP P          G P PP
Sbjct: 614 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP 652


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/39 (33%), Positives = 14/39 (35%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           PPP      +P      PPPP P          G P PP
Sbjct: 440 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP 478


>U23172-13|ABH03527.1|  282|Caenorhabditis elegans Hypothetical
           protein F25B5.7c protein.
          Length = 282

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/46 (36%), Positives = 17/46 (36%)
 Frame = +2

Query: 212 RXKKXGGEGPPQRAFFXXKPXGXGGGGPPXXKXGEKXXPPXGGGXP 349
           R    G  GPP        P   G GGPP    G    PP G G P
Sbjct: 165 RGPPGGMGGPPGHGGMGGPPGHGGQGGPPG--HGGMGGPPPGQGGP 208


>U23172-12|ABH03526.1|  562|Caenorhabditis elegans Hypothetical
           protein F25B5.7a protein.
          Length = 562

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/46 (36%), Positives = 17/46 (36%)
 Frame = +2

Query: 212 RXKKXGGEGPPQRAFFXXKPXGXGGGGPPXXKXGEKXXPPXGGGXP 349
           R    G  GPP        P   G GGPP    G    PP G G P
Sbjct: 445 RGPPGGMGGPPGHGGMGGPPGHGGQGGPPG--HGGMGGPPPGQGGP 488


>AL117204-20|CAB55136.2|  699|Caenorhabditis elegans Hypothetical
           protein Y116A8C.32 protein.
          Length = 699

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/39 (38%), Positives = 15/39 (38%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           PPP G   F P      PPPP P        L   P PP
Sbjct: 664 PPPGGLGGFMPP-----PPPPPPMPGDLSSLLAAAPPPP 697


>AJ243905-1|CAB64866.1|  699|Caenorhabditis elegans SF1 protein
           protein.
          Length = 699

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/39 (38%), Positives = 15/39 (38%)
 Frame = -2

Query: 342 PPPXGGXXFSPXFXXGGPPPPXPXGXXXKXALWGGPSPP 226
           PPP G   F P      PPPP P        L   P PP
Sbjct: 664 PPPGGLGGFMPP-----PPPPPPMPGDLSSLLAAAPPPP 697


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,106,622
Number of Sequences: 27780
Number of extensions: 233890
Number of successful extensions: 815
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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