Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_C12
         (1201 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-399|AAM68891.2|  409|Drosophila melanogaster CG11112-PB...    31   4.1  
AE014134-733|AAO41157.1|  579|Drosophila melanogaster CG33003-PA...    25   6.5  
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P...    27   7.1  

>AE013599-399|AAM68891.2|  409|Drosophila melanogaster CG11112-PB,
           isoform B protein.
          Length = 409

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 74  PXXFXNPXXXXQXXPPTPPXPPPP 3
           P  F  P    +  PP PP PPPP
Sbjct: 215 PPPFYKPSRPNRRPPPPPPPPPPP 238


>AE014134-733|AAO41157.1|  579|Drosophila melanogaster CG33003-PA
           protein.
          Length = 579

 Score = 25.0 bits (52), Expect(2) = 6.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 32  PPTPPXPPPP 3
           PPT P PPPP
Sbjct: 478 PPTEPPPPPP 487



 Score = 23.4 bits (48), Expect(2) = 6.5
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -3

Query: 59  NPXXXXQXXPPTPPXPPP 6
           +P       PP PP PPP
Sbjct: 462 HPPPPPPPPPPPPPPPPP 479


>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
           protein.
          Length = 4129

 Score = 26.6 bits (56), Expect(2) = 7.1
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 32  PPTPPXPPPP 3
           PP+PP PPPP
Sbjct: 687 PPSPPPPPPP 696



 Score = 21.4 bits (43), Expect(2) = 7.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -3

Query: 41  QXXPPTPPXPP 9
           Q  PP PP PP
Sbjct: 647 QSGPPPPPIPP 657


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,653,714
Number of Sequences: 53049
Number of extensions: 97219
Number of successful extensions: 2254
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1779
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6356408760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)