Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_C04
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28928-9|AAN63431.1| 471|Caenorhabditis elegans Hypothetical pr... 153 1e-37
Z46934-7|CAA87047.1| 472|Caenorhabditis elegans Hypothetical pr... 104 8e-23
AL032632-12|CAA21589.3| 333|Caenorhabditis elegans Hypothetical... 87 1e-17
AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen prot... 31 0.71
AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen prot... 29 2.9
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 29 3.8
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 29 3.8
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical p... 29 5.0
Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical p... 29 5.0
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 5.0
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 5.0
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 5.0
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 28 6.6
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 28 6.6
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 28 6.6
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 28 6.6
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 28 6.6
AC025715-8|AAK68439.2| 531|Caenorhabditis elegans Enhanced rnai... 28 6.6
Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 28 8.8
>U28928-9|AAN63431.1| 471|Caenorhabditis elegans Hypothetical
protein C44B7.10 protein.
Length = 471
Score = 153 bits (372), Expect = 1e-37
Identities = 81/179 (45%), Positives = 105/179 (58%), Gaps = 2/179 (1%)
Frame = -3
Query: 741 KSGLTVFAQGAXATPVXXFNAMTEVGKSGSLRDIKVVHMHTEKDAAYVTPECKDIFRSVS 562
KSG VF G ATP +++E + +L IK+ H+H E + +D RS S
Sbjct: 51 KSGDNVFVHGIAATPTPLLQSLSEHAVANNLNKIKLHHLHLEGATPWTAEGVRDRIRSNS 110
Query: 561 LFMAANVRKSVAEGRSDAIPIFLQDIPKLFHRKIIQPDIALIQVSPPDNHGYCSLGTSVD 382
LF N+R V G +D FL ++P LF + I+ + +LIQVSPPD G+CSLGTSVD
Sbjct: 111 LFTGHNLRACVNNGIADFNSCFLYEVPLLFRKGAIKLNASLIQVSPPDAFGFCSLGTSVD 170
Query: 381 CVRAALVNSKIIIAQVNVNMPRTFGDAIIHVSHIDYAVE--DNTPLPEHGVGKAASAEE 211
RAA+ NS +IIA VN NMPRTFGD +IHVSHIDY V D L + +G E+
Sbjct: 171 TARAAVTNSPLIIAMVNKNMPRTFGDGVIHVSHIDYLVNEADGFELHQRNIGPQNDQEK 229
Score = 96.7 bits (230), Expect = 2e-20
Identities = 41/63 (65%), Positives = 57/63 (90%)
Frame = -1
Query: 215 RKTEIGRLIGENLVEDGATLQMGIGSIPDAVLSALKDHKDLGIHSEMFSVGVIDLVKRGA 36
++ +IG++I ENLV++GATLQMGIG++PDA LSAL +HKDLGIH+EMFS GV+DL+++ A
Sbjct: 227 QEKKIGKIIAENLVDNGATLQMGIGAVPDAALSALSNHKDLGIHTEMFSDGVLDLIEKNA 286
Query: 35 VTN 27
+TN
Sbjct: 287 ITN 289
>Z46934-7|CAA87047.1| 472|Caenorhabditis elegans Hypothetical
protein ZK1320.9 protein.
Length = 472
Score = 104 bits (249), Expect = 8e-23
Identities = 59/178 (33%), Positives = 89/178 (50%)
Frame = -3
Query: 783 P*YSTAKEAFEKFXKSGLTVFAQGAXATPVXXFNAMTEVGKSGSLRDIKVVHMHTEKDAA 604
P Y +A EA S ++ + P A+ S +L +I++ H+ +
Sbjct: 40 PKYVSADEALA-MVNSDSDIYVGNHASAPNVLLEALCRRVDSANLNNIRMSHLILSGNCP 98
Query: 603 YVTPECKDIFRSVSLFMAANVRKSVAEGRSDAIPIFLQDIPKLFHRKIIQPDIALIQVSP 424
P+ ++ SLF+ RK+V G +D PIFL ++P L+ + D ALI VSP
Sbjct: 99 QFDPKYHGKIQNNSLFICPGNRKNVNLGAADYTPIFLSEVPSLYTSGTLNVDFALITVSP 158
Query: 423 PDNHGYCSLGTSVDCVRAALVNSKIIIAQVNVNMPRTFGDAIIHVSHIDYAVEDNTPL 250
PD G+C+LG +D AA ++K IIA VN MPRT G +H SH V+ + P+
Sbjct: 159 PDELGFCTLGVDIDTTLAAATSAKKIIALVNSTMPRTRGHTTVHSSHFAAMVQTDRPI 216
Score = 93.9 bits (223), Expect = 1e-19
Identities = 40/69 (57%), Positives = 55/69 (79%)
Frame = -1
Query: 233 GRRPAPRKTEIGRLIGENLVEDGATLQMGIGSIPDAVLSALKDHKDLGIHSEMFSVGVID 54
G + + IG++I ENLV++GATLQ+GIG+IPD+ L+A+K HKDLG+H+EMFS GVID
Sbjct: 223 GEEMSETEQRIGKIIAENLVDNGATLQLGIGAIPDSALAAMKQHKDLGVHTEMFSDGVID 282
Query: 53 LVKRGAVTN 27
L+ RG + N
Sbjct: 283 LIDRGIINN 291
>AL032632-12|CAA21589.3| 333|Caenorhabditis elegans Hypothetical
protein Y11D7A.1 protein.
Length = 333
Score = 87.0 bits (206), Expect = 1e-17
Identities = 42/105 (40%), Positives = 60/105 (57%)
Frame = -3
Query: 564 SLFMAANVRKSVAEGRSDAIPIFLQDIPKLFHRKIIQPDIALIQVSPPDNHGYCSLGTSV 385
SLF+ RK+V G +D PIFL ++P ++ + ALI VSPPD G+C+LG +
Sbjct: 54 SLFICPGNRKNVKLGAADYTPIFLSEVPSVYTSGTLNVHFALITVSPPDELGFCTLGVDI 113
Query: 384 DCVRAALVNSKIIIAQVNVNMPRTFGDAIIHVSHIDYAVEDNTPL 250
D AA ++K IIA N MPR+ G +H SH V+ + P+
Sbjct: 114 DTTLAAATSAKKIIALANSTMPRSRGHTTVHSSHFAAMVQTDRPI 158
>AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen protein
107, isoform b protein.
Length = 294
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = -3
Query: 234 GKAASAEENGDRAADWREPRRGRRHAADGYRQHPGCRAVGPEGPQGPRHPLG 79
G +A E GD A ++ G G G A GP GP+GP P G
Sbjct: 167 GAPGAAGEQGDAGAAGQDGEAGAP-GGPGKNGQRGSGAPGPAGPEGPAGPAG 217
>AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen protein
69 protein.
Length = 394
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -3
Query: 255 PLPEHGVGKAASAEENGDRAADWREPRRGRRHAADGYRQH-PGCRAVGPEGPQGPRHPLG 79
P P+ G + E G R D R G A Y Q PGC P+GPQGP +G
Sbjct: 140 PGPQGPTGYPGAPGEPGSRGLDGRPGANGVTLIA--YDQEIPGCIQC-PQGPQGPPGAVG 196
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 430 DLDKSDVGLDDLPVEQLGDVLKEDGNGVG 516
D K DL EQL D EDGNG G
Sbjct: 472 DAQKPSTSSSDLTAEQLQDPTAEDGNGDG 500
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 430 DLDKSDVGLDDLPVEQLGDVLKEDGNGVG 516
D K DL EQL D EDGNG G
Sbjct: 472 DAQKPSTSSSDLTAEQLQDPTAEDGNGDG 500
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -3
Query: 219 AEENGDRAADWREP-RRGRRHAADGYRQHPGCRAVGPEGPQGPRHPLGDVQCRRHRPGEE 43
A+++ DRA E R RR A + R+ + R D + RR R EE
Sbjct: 1396 AKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED-RKRRQDEEDRRRREEEE 1454
Query: 42 RSRHQQPEEKKKK 4
R R ++ E+++KK
Sbjct: 1455 RRRREEEEKRRKK 1467
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -3
Query: 219 AEENGDRAADWREP-RRGRRHAADGYRQHPGCRAVGPEGPQGPRHPLGDVQCRRHRPGEE 43
A+++ DRA E R RR A + R+ + R D + RR R EE
Sbjct: 1408 AKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED-RKRRQDEEDRRRREEEE 1466
Query: 42 RSRHQQPEEKKKK 4
R R ++ E+++KK
Sbjct: 1467 RRRREEEEKRRKK 1479
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -3
Query: 219 AEENGDRAADWREP-RRGRRHAADGYRQHPGCRAVGPEGPQGPRHPLGDVQCRRHRPGEE 43
A+++ DRA E R RR A + R+ + R D + RR R EE
Sbjct: 1295 AKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED-RKRRQDEEDRRRREEEE 1353
Query: 42 RSRHQQPEEKKKK 4
R R ++ E+++KK
Sbjct: 1354 RRRREEEEKRRKK 1366
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -3
Query: 219 AEENGDRAADWREP-RRGRRHAADGYRQHPGCRAVGPEGPQGPRHPLGDVQCRRHRPGEE 43
A+++ DRA E R RR A + R+ + R D + RR R EE
Sbjct: 1377 AKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED-RKRRQDEEDRRRREEEE 1435
Query: 42 RSRHQQPEEKKKK 4
R R ++ E+++KK
Sbjct: 1436 RRRREEEEKRRKK 1448
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -3
Query: 219 AEENGDRAADWREP-RRGRRHAADGYRQHPGCRAVGPEGPQGPRHPLGDVQCRRHRPGEE 43
A+++ DRA E R RR A + R+ + R D + RR R EE
Sbjct: 1396 AKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED-RKRRQDEEDRRRREEEE 1454
Query: 42 RSRHQQPEEKKKK 4
R R ++ E+++KK
Sbjct: 1455 RRRREEEEKRRKK 1467
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -3
Query: 219 AEENGDRAADWREP-RRGRRHAADGYRQHPGCRAVGPEGPQGPRHPLGDVQCRRHRPGEE 43
A+++ DRA E R RR A + R+ + R D + RR R EE
Sbjct: 1408 AKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED-RKRRQDEEDRRRREEEE 1466
Query: 42 RSRHQQPEEKKKK 4
R R ++ E+++KK
Sbjct: 1467 RRRREEEEKRRKK 1479
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -3
Query: 219 AEENGDRAADWREP-RRGRRHAADGYRQHPGCRAVGPEGPQGPRHPLGDVQCRRHRPGEE 43
A+++ DRA E R RR A + R+ + R D + RR R EE
Sbjct: 1295 AKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED-RKRRQDEEDRRRREEEE 1353
Query: 42 RSRHQQPEEKKKK 4
R R ++ E+++KK
Sbjct: 1354 RRRREEEEKRRKK 1366
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -3
Query: 219 AEENGDRAADWREP-RRGRRHAADGYRQHPGCRAVGPEGPQGPRHPLGDVQCRRHRPGEE 43
A+++ DRA E R RR A + R+ + R D + RR R EE
Sbjct: 1377 AKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED-RKRRQDEEDRRRREEEE 1435
Query: 42 RSRHQQPEEKKKK 4
R R ++ E+++KK
Sbjct: 1436 RRRREEEEKRRKK 1448
>Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical
protein K07F5.13c protein.
Length = 639
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 179 GSRQSAARSPFSSALAAFPTPCSGRGVLS 265
GS Q A+SP ++ LAAF + G G LS
Sbjct: 119 GSTQQTAKSPVATRLAAFKSGTLGAGSLS 147
>Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical
protein K07F5.13a protein.
Length = 612
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 179 GSRQSAARSPFSSALAAFPTPCSGRGVLS 265
GS Q A+SP ++ LAAF + G G LS
Sbjct: 92 GSTQQTAKSPVATRLAAFKSGTLGAGSLS 120
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -3
Query: 219 AEENGDRAADWREP-RRGRRHAADGYRQHPGCRAVGPEGPQGPRHPLGDVQCRRHRPGEE 43
A+++ DRA E R RR A + R+ + R D + RR R EE
Sbjct: 1408 AKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED-RKRRQDEEDRRRREEEE 1466
Query: 42 RSRHQQPEEKKKK 4
R R ++ E+++KK
Sbjct: 1467 RRRREEEEKRRKK 1479
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -3
Query: 219 AEENGDRAADWREP-RRGRRHAADGYRQHPGCRAVGPEGPQGPRHPLGDVQCRRHRPGEE 43
A+++ DRA E R RR A + R+ + R D + RR R EE
Sbjct: 1408 AKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED-RKRRQDEEDRRRREEEE 1466
Query: 42 RSRHQQPEEKKKK 4
R R ++ E+++KK
Sbjct: 1467 RRRREEEEKRRKK 1479
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -3
Query: 219 AEENGDRAADWREP-RRGRRHAADGYRQHPGCRAVGPEGPQGPRHPLGDVQCRRHRPGEE 43
A+++ DRA E R RR A + R+ + R D + RR R EE
Sbjct: 1408 AKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED-RKRRQDEEDRRRREEEE 1466
Query: 42 RSRHQQPEEKKKK 4
R R ++ E+++KK
Sbjct: 1467 RRRREEEEKRRKK 1479
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +2
Query: 503 GMASERPSATDLRTFAAINNDTDLNMSLHSGVTYAASFSVCIWTTLMSRNDPLFPTSVMA 682
G E+PSA R D+ SG A+FSV I + DP VMA
Sbjct: 46 GFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRI-DHEDPHVQALVMA 104
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein
36 protein.
Length = 307
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 117 GPEGPQGPRHPLGDVQCRRHRP 52
GP GPQGP+ P GD H P
Sbjct: 278 GPPGPQGPQGPPGDEGSCDHCP 299
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +2
Query: 503 GMASERPSATDLRTFAAINNDTDLNMSLHSGVTYAASFSVCIWTTLMSRNDPLFPTSVMA 682
G E+PSA R D+ SG A+FSV I + DP VMA
Sbjct: 46 GFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRI-DHEDPHVQALVMA 104
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 117 GPEGPQGPRHPLGDVQCRRHRP 52
GP GPQGP+ P GD H P
Sbjct: 278 GPPGPQGPQGPPGDEGSCDHCP 299
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/62 (38%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Frame = -3
Query: 249 PEHGVGKAAS--AEENGDRAADWREPRRGR--RHAADGYRQ-HPGCRAVGPEGPQGPRHP 85
P HG G A A G R A + G R D Q +PG A G GPQGP P
Sbjct: 181 PGHGGGSGAPGPAGPKGQRGAPGHPGQAGSPGRPGVDAQSQSNPG--APGQAGPQGPPGP 238
Query: 84 LG 79
G
Sbjct: 239 SG 240
>AC025715-8|AAK68439.2| 531|Caenorhabditis elegans Enhanced rnai
(rna interference)protein 5 protein.
Length = 531
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 73 NISEWMPRSLWSF-RADSTASGMLPIPICSVAPSSTRFSPISRP 201
+++EW +L F RAD + ML P C+V+P +PI P
Sbjct: 274 HVAEWNDTALEQFRRADGSFWAMLE-PSCTVSPWEMHVTPILAP 316
>Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical
protein C12D8.8 protein.
Length = 295
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 213 ENGDRAADWREPRRGRRHAADGYRQHPGCRAVGPEGPQGPRHPLG 79
ENG ++ + GR + ADG R + A G +G GP P G
Sbjct: 192 ENGQPGQSGKDGQPGR-NGADGKRGYGAPGAPGAQGKPGPSGPPG 235
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3
Query: 153 DGYRQHPGCRAVGPEGPQGPRHPLGD 76
+G HPG G +GP GPR P GD
Sbjct: 155 NGQPGHPG--QGGSQGPAGPRGPAGD 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,956,702
Number of Sequences: 27780
Number of extensions: 382499
Number of successful extensions: 1821
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1762
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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