Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_B24
(810 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X85237-1|CAA59494.1| 793|Homo sapiens human splicing factor pro... 151 2e-36
CR456575-1|CAG30461.1| 793|Homo sapiens SF3A1 protein. 151 2e-36
BC007684-1|AAH07684.1| 793|Homo sapiens splicing factor 3a, sub... 151 2e-36
BC001976-1|AAH01976.1| 793|Homo sapiens splicing factor 3a, sub... 151 2e-36
AC004997-4|AAC23435.1| 793|Homo sapiens spliceosome associated ... 151 2e-36
>X85237-1|CAA59494.1| 793|Homo sapiens human splicing factor
protein.
Length = 793
Score = 151 bits (367), Expect = 2e-36
Identities = 83/167 (49%), Positives = 104/167 (62%), Gaps = 3/167 (1%)
Frame = -1
Query: 495 PLPPRPDRVVVKK-YNPKEAKPR--AAAGDEWLVLPITGEKIPASKVAEHVRIGLLDPRW 325
PLPP PD+V+V+K Y+PK +KP A A DE+LV PITGEKIPASK+ EH+RIGLLDPRW
Sbjct: 379 PLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRW 438
Query: 324 LXXXXXXXXXXXXXXXALAPGAAIEASLKQLAERRTDIFGVXXXXXXXXXXXXXXXXKRD 145
L APG IE+SLKQLAERRTDIFGV +
Sbjct: 439 LEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEEEIQKP-E 497
Query: 144 ERVTWDGHTSSVEAATRAARAHITLEDQIQQIXQG*RSTPRRGKKKK 4
E+VTWDGH+ S+ +AA+A+ITL++QI+ I + P K+K
Sbjct: 498 EKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDTKEK 544
>CR456575-1|CAG30461.1| 793|Homo sapiens SF3A1 protein.
Length = 793
Score = 151 bits (367), Expect = 2e-36
Identities = 83/167 (49%), Positives = 104/167 (62%), Gaps = 3/167 (1%)
Frame = -1
Query: 495 PLPPRPDRVVVKK-YNPKEAKPR--AAAGDEWLVLPITGEKIPASKVAEHVRIGLLDPRW 325
PLPP PD+V+V+K Y+PK +KP A A DE+LV PITGEKIPASK+ EH+RIGLLDPRW
Sbjct: 379 PLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRW 438
Query: 324 LXXXXXXXXXXXXXXXALAPGAAIEASLKQLAERRTDIFGVXXXXXXXXXXXXXXXXKRD 145
L APG IE+SLKQLAERRTDIFGV +
Sbjct: 439 LEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEEEIQKP-E 497
Query: 144 ERVTWDGHTSSVEAATRAARAHITLEDQIQQIXQG*RSTPRRGKKKK 4
E+VTWDGH+ S+ +AA+A+ITL++QI+ I + P K+K
Sbjct: 498 EKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDTKEK 544
>BC007684-1|AAH07684.1| 793|Homo sapiens splicing factor 3a,
subunit 1, 120kDa protein.
Length = 793
Score = 151 bits (367), Expect = 2e-36
Identities = 83/167 (49%), Positives = 104/167 (62%), Gaps = 3/167 (1%)
Frame = -1
Query: 495 PLPPRPDRVVVKK-YNPKEAKPR--AAAGDEWLVLPITGEKIPASKVAEHVRIGLLDPRW 325
PLPP PD+V+V+K Y+PK +KP A A DE+LV PITGEKIPASK+ EH+RIGLLDPRW
Sbjct: 379 PLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRW 438
Query: 324 LXXXXXXXXXXXXXXXALAPGAAIEASLKQLAERRTDIFGVXXXXXXXXXXXXXXXXKRD 145
L APG IE+SLKQLAERRTDIFGV +
Sbjct: 439 LEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEEEIQKP-E 497
Query: 144 ERVTWDGHTSSVEAATRAARAHITLEDQIQQIXQG*RSTPRRGKKKK 4
E+VTWDGH+ S+ +AA+A+ITL++QI+ I + P K+K
Sbjct: 498 EKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDTKEK 544
>BC001976-1|AAH01976.1| 793|Homo sapiens splicing factor 3a,
subunit 1, 120kDa protein.
Length = 793
Score = 151 bits (367), Expect = 2e-36
Identities = 83/167 (49%), Positives = 104/167 (62%), Gaps = 3/167 (1%)
Frame = -1
Query: 495 PLPPRPDRVVVKK-YNPKEAKPR--AAAGDEWLVLPITGEKIPASKVAEHVRIGLLDPRW 325
PLPP PD+V+V+K Y+PK +KP A A DE+LV PITGEKIPASK+ EH+RIGLLDPRW
Sbjct: 379 PLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRW 438
Query: 324 LXXXXXXXXXXXXXXXALAPGAAIEASLKQLAERRTDIFGVXXXXXXXXXXXXXXXXKRD 145
L APG IE+SLKQLAERRTDIFGV +
Sbjct: 439 LEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEEEIQKP-E 497
Query: 144 ERVTWDGHTSSVEAATRAARAHITLEDQIQQIXQG*RSTPRRGKKKK 4
E+VTWDGH+ S+ +AA+A+ITL++QI+ I + P K+K
Sbjct: 498 EKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDTKEK 544
>AC004997-4|AAC23435.1| 793|Homo sapiens spliceosome associated
protein 114 (SF3a) protein.
Length = 793
Score = 151 bits (367), Expect = 2e-36
Identities = 83/167 (49%), Positives = 104/167 (62%), Gaps = 3/167 (1%)
Frame = -1
Query: 495 PLPPRPDRVVVKK-YNPKEAKPR--AAAGDEWLVLPITGEKIPASKVAEHVRIGLLDPRW 325
PLPP PD+V+V+K Y+PK +KP A A DE+LV PITGEKIPASK+ EH+RIGLLDPRW
Sbjct: 379 PLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRW 438
Query: 324 LXXXXXXXXXXXXXXXALAPGAAIEASLKQLAERRTDIFGVXXXXXXXXXXXXXXXXKRD 145
L APG IE+SLKQLAERRTDIFGV +
Sbjct: 439 LEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEEEIQKP-E 497
Query: 144 ERVTWDGHTSSVEAATRAARAHITLEDQIQQIXQG*RSTPRRGKKKK 4
E+VTWDGH+ S+ +AA+A+ITL++QI+ I + P K+K
Sbjct: 498 EKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDTKEK 544
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,245,816
Number of Sequences: 237096
Number of extensions: 1281854
Number of successful extensions: 3658
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3626
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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