Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_B19
         (781 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0094 + 14378953-14380728                                        189   2e-48
07_03_1408 - 26353389-26355191                                        186   1e-47
12_01_0400 + 3169597-3170504,3170510-3171269                           29   3.1  
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713...    28   7.2  
03_05_0388 + 23726957-23727418,23730016-23730262,23731072-237312...    28   9.6  
03_01_0366 - 2848449-2849032,2849155-2849233,2849346-2849608,284...    28   9.6  

>03_03_0094 + 14378953-14380728
          Length = 591

 Score =  189 bits (461), Expect = 2e-48
 Identities = 79/132 (59%), Positives = 109/132 (82%)
 Frame = -3

Query: 656 IKPLEGFXIVHQRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVAL 477
           + PLE     ++R+ +KDSAVNA+CYGAK+++PG+LR+E+ IEV +E+V++TTKGEA+A+
Sbjct: 304 VMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENEIEVGEEVVLMTTKGEAIAI 363

Query: 476 AVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPN 297
            +A MTT+ MA+CDHG  AK+KRV+M+RDTYPRKWGLGP A +KK ++ +G LDK+GKPN
Sbjct: 364 GIAEMTTAVMATCDHGAVAKIKRVVMDRDTYPRKWGLGPVALKKKKMVAEGLLDKHGKPN 423

Query: 296 ENTPKEWLNSYV 261
           E TP EWL + V
Sbjct: 424 EKTPSEWLRNAV 435


>07_03_1408 - 26353389-26355191
          Length = 600

 Score =  186 bits (454), Expect = 1e-47
 Identities = 76/130 (58%), Positives = 108/130 (83%)
 Frame = -3

Query: 656 IKPLEGFXIVHQRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVAL 477
           + PLE     ++R+ +KDSAVNA+CYGAK+++PG+LR+E+ I+V +E+V++TTKGEA+A+
Sbjct: 300 VMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIDVGEEVVLMTTKGEAIAI 359

Query: 476 AVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPN 297
            +A MTT+ MA+CDHG  AK+KRV+M+RDTYPRKWGLGP A +KK ++ +G LDK+GKPN
Sbjct: 360 GIAEMTTAVMATCDHGAVAKIKRVVMDRDTYPRKWGLGPVALKKKKMVAEGLLDKHGKPN 419

Query: 296 ENTPKEWLNS 267
           E TP EW+ +
Sbjct: 420 EKTPAEWIRN 429


>12_01_0400 + 3169597-3170504,3170510-3171269
          Length = 555

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 349 CEAFGPRPHFLGYVSRSIMTRLSFAATP 432
           CEA  P  H   Y +R +  R+S AATP
Sbjct: 212 CEATSPVDHLAYYFARGLKLRISGAATP 239


>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
            7139996-7140076,7140805-7140895,7141242-7141330,
            7141749-7141802,7141906-7142085,7142175-7142237,
            7142575-7142705,7142807-7142900,7143343-7143684,
            7143957-7144348,7145010-7148487,7149101-7149187,
            7149324-7149367,7149495-7149591,7150429-7150572
          Length = 1873

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = -3

Query: 245  KEPENGDGVEEGSRKRTASTANAEDPDVSIEVXXXXXXXXXKRDSEAPAEADATMDTS-E 69
            K PE+    E+ S K  A T   EDP V++E           + S  P + +A ++   E
Sbjct: 1164 KLPEDSTTFEKPSEKDDAGTKQTEDP-VTLE-----KEPEEDKGSVEPTQDNAGLEKPLE 1217

Query: 68   SPETAEQPADDSV 30
              E + +P++DSV
Sbjct: 1218 EDEASAKPSEDSV 1230


>03_05_0388 +
           23726957-23727418,23730016-23730262,23731072-23731220,
           23731313-23731597,23731665-23731889,23734251-23734445
          Length = 520

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = -3

Query: 338 LIQQGKLDKYGK-PNENTPKEWLNSY--VNYNVKKEPENGDGVEEGSRKRTASTANAEDP 168
           L++    D  G+ P  +  +E L  Y  V++   +EP+N D VEEG+      +  +E+P
Sbjct: 4   LVENFDADDLGEMPQNHYNEEQLIPYSDVSHPYNEEPDNMDNVEEGNPYIQQVSLYSEEP 63

Query: 167 D 165
           +
Sbjct: 64  E 64


>03_01_0366 -
           2848449-2849032,2849155-2849233,2849346-2849608,
           2849742-2849862
          Length = 348

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -3

Query: 248 KKEPENGDGVEEGSRKRTASTANAEDPDVSIEVXXXXXXXXXKRDSEAPAEA 93
           KK+ + GD  + G +K+ A+  + +D   SIEV            + APAEA
Sbjct: 204 KKKDKGGDA-DGGEKKKDAAGGDKKDKGKSIEVAGPSTAAAAASMAPAPAEA 254


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,825,332
Number of Sequences: 37544
Number of extensions: 338251
Number of successful extensions: 951
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)