Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_B19
(781 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U59151-1|AAB94299.1| 514|Homo sapiens Cbf5p homolog protein. 217 5e-56
BC010015-1|AAH10015.1| 514|Homo sapiens dyskeratosis congenita ... 217 5e-56
BC009928-1|AAH09928.1| 514|Homo sapiens dyskeratosis congenita ... 217 5e-56
AJ224481-1|CAA11970.1| 514|Homo sapiens dyskerin protein. 217 5e-56
AJ010395-1|CAB51168.1| 524|Homo sapiens dyskerin protein. 217 5e-56
AF067023-1|AAD20232.1| 514|Homo sapiens dyskerin protein. 217 5e-56
AF067008-1|AAD11815.1| 514|Homo sapiens dyskerin protein. 217 5e-56
>U59151-1|AAB94299.1| 514|Homo sapiens Cbf5p homolog protein.
Length = 514
Score = 217 bits (529), Expect = 5e-56
Identities = 93/141 (65%), Positives = 121/141 (85%), Gaps = 2/141 (1%)
Frame = -3
Query: 656 IKPLEGFXIVHQRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVAL 477
+ PLE H+R+ +KDSAVNA+CYGAK++LPG+LRYEDGIEV+QEIV++TTKGEA+ +
Sbjct: 286 VYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICM 345
Query: 476 AVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPN 297
A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+QG LDK+GKP
Sbjct: 346 AIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIKQGLLDKHGKPT 405
Query: 296 ENTPKEWLNSYVNY--NVKKE 240
++TP W YV+Y + KKE
Sbjct: 406 DSTPATWKQEYVDYSESAKKE 426
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 714 LDAQWXYETXKDEXYFXRV 658
LDAQW Y+ KDE Y RV
Sbjct: 267 LDAQWLYDNHKDESYLRRV 285
>BC010015-1|AAH10015.1| 514|Homo sapiens dyskeratosis congenita 1,
dyskerin protein.
Length = 514
Score = 217 bits (529), Expect = 5e-56
Identities = 93/141 (65%), Positives = 121/141 (85%), Gaps = 2/141 (1%)
Frame = -3
Query: 656 IKPLEGFXIVHQRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVAL 477
+ PLE H+R+ +KDSAVNA+CYGAK++LPG+LRYEDGIEV+QEIV++TTKGEA+ +
Sbjct: 286 VYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICM 345
Query: 476 AVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPN 297
A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+QG LDK+GKP
Sbjct: 346 AIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIKQGLLDKHGKPT 405
Query: 296 ENTPKEWLNSYVNY--NVKKE 240
++TP W YV+Y + KKE
Sbjct: 406 DSTPATWKQEYVDYSESAKKE 426
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 714 LDAQWXYETXKDEXYFXRV 658
LDAQW Y+ KDE Y RV
Sbjct: 267 LDAQWLYDNHKDESYLRRV 285
>BC009928-1|AAH09928.1| 514|Homo sapiens dyskeratosis congenita 1,
dyskerin protein.
Length = 514
Score = 217 bits (529), Expect = 5e-56
Identities = 93/141 (65%), Positives = 121/141 (85%), Gaps = 2/141 (1%)
Frame = -3
Query: 656 IKPLEGFXIVHQRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVAL 477
+ PLE H+R+ +KDSAVNA+CYGAK++LPG+LRYEDGIEV+QEIV++TTKGEA+ +
Sbjct: 286 VYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICM 345
Query: 476 AVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPN 297
A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+QG LDK+GKP
Sbjct: 346 AIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIKQGLLDKHGKPT 405
Query: 296 ENTPKEWLNSYVNY--NVKKE 240
++TP W YV+Y + KKE
Sbjct: 406 DSTPATWKQEYVDYSESAKKE 426
>AJ224481-1|CAA11970.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 217 bits (529), Expect = 5e-56
Identities = 93/141 (65%), Positives = 121/141 (85%), Gaps = 2/141 (1%)
Frame = -3
Query: 656 IKPLEGFXIVHQRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVAL 477
+ PLE H+R+ +KDSAVNA+CYGAK++LPG+LRYEDGIEV+QEIV++TTKGEA+ +
Sbjct: 286 VYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICM 345
Query: 476 AVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPN 297
A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+QG LDK+GKP
Sbjct: 346 AIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIKQGLLDKHGKPT 405
Query: 296 ENTPKEWLNSYVNY--NVKKE 240
++TP W YV+Y + KKE
Sbjct: 406 DSTPATWKQEYVDYSESAKKE 426
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 714 LDAQWXYETXKDEXYFXRV 658
LDAQW Y+ KDE Y RV
Sbjct: 267 LDAQWLYDNHKDESYLRRV 285
>AJ010395-1|CAB51168.1| 524|Homo sapiens dyskerin protein.
Length = 524
Score = 217 bits (529), Expect = 5e-56
Identities = 93/141 (65%), Positives = 121/141 (85%), Gaps = 2/141 (1%)
Frame = -3
Query: 656 IKPLEGFXIVHQRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVAL 477
+ PLE H+R+ +KDSAVNA+CYGAK++LPG+LRYEDGIEV+QEIV++TTKGEA+ +
Sbjct: 286 VYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICM 345
Query: 476 AVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPN 297
A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+QG LDK+GKP
Sbjct: 346 AIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIKQGLLDKHGKPT 405
Query: 296 ENTPKEWLNSYVNY--NVKKE 240
++TP W YV+Y + KKE
Sbjct: 406 DSTPATWKQEYVDYSESAKKE 426
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 714 LDAQWXYETXKDEXYFXRV 658
LDAQW Y+ KDE Y RV
Sbjct: 267 LDAQWLYDNHKDESYLRRV 285
>AF067023-1|AAD20232.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 217 bits (529), Expect = 5e-56
Identities = 93/141 (65%), Positives = 121/141 (85%), Gaps = 2/141 (1%)
Frame = -3
Query: 656 IKPLEGFXIVHQRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVAL 477
+ PLE H+R+ +KDSAVNA+CYGAK++LPG+LRYEDGIEV+QEIV++TTKGEA+ +
Sbjct: 286 VYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICM 345
Query: 476 AVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPN 297
A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+QG LDK+GKP
Sbjct: 346 AIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIKQGLLDKHGKPT 405
Query: 296 ENTPKEWLNSYVNY--NVKKE 240
++TP W YV+Y + KKE
Sbjct: 406 DSTPATWKQEYVDYSESAKKE 426
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 714 LDAQWXYETXKDEXYFXRV 658
LDAQW Y+ KDE Y RV
Sbjct: 267 LDAQWLYDNHKDESYLRRV 285
>AF067008-1|AAD11815.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 217 bits (529), Expect = 5e-56
Identities = 93/141 (65%), Positives = 121/141 (85%), Gaps = 2/141 (1%)
Frame = -3
Query: 656 IKPLEGFXIVHQRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVAL 477
+ PLE H+R+ +KDSAVNA+CYGAK++LPG+LRYEDGIEV+QEIV++TTKGEA+ +
Sbjct: 286 VYPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICM 345
Query: 476 AVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPN 297
A+ALMTT+ +++CDHG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+QG LDK+GKP
Sbjct: 346 AIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIKQGLLDKHGKPT 405
Query: 296 ENTPKEWLNSYVNY--NVKKE 240
++TP W YV+Y + KKE
Sbjct: 406 DSTPATWKQEYVDYSESAKKE 426
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 714 LDAQWXYETXKDEXYFXRV 658
LDAQW Y+ KDE Y RV
Sbjct: 267 LDAQWLYDNHKDESYLRRV 285
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,324,965
Number of Sequences: 237096
Number of extensions: 1859177
Number of successful extensions: 4289
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4287
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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