Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_B19
         (781 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical pr...   201   4e-52
U23517-9|AAB93334.2|  314|Caenorhabditis elegans Ubiquitin conju...    30   1.6  
U80838-6|AAC71115.1|  169|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U80028-10|AAN73868.2|  376|Caenorhabditis elegans Serpentine rec...    28   6.5  
Z82274-8|CAB05230.3|  467|Caenorhabditis elegans Hypothetical pr...    28   8.6  
Z80789-1|CAB02551.1|  708|Caenorhabditis elegans Hypothetical pr...    28   8.6  
U23139-6|AAK31489.2|  520|Caenorhabditis elegans Hypothetical pr...    28   8.6  

>Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical
           protein K01G5.5 protein.
          Length = 445

 Score =  201 bits (491), Expect = 4e-52
 Identities = 92/168 (54%), Positives = 121/168 (72%), Gaps = 4/168 (2%)
 Frame = -3

Query: 656 IKPLEGFXIVHQRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVAL 477
           ++PLE     H+R+ +KDS +NA+CYGAK+L+PGILRY+D IEV +EIVI++TKGEA+ +
Sbjct: 274 VRPLEALLTQHKRVVVKDSCINAICYGAKILIPGILRYDDDIEVGKEIVIMSTKGEAICI 333

Query: 476 AVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPN 297
           A+A M TST+AS DHGV AK KRVIMERD Y RKWGLGP AS+KK +++ G LDK+GKPN
Sbjct: 334 AIAQMNTSTIASVDHGVVAKSKRVIMERDVYGRKWGLGPVASKKKQMVKDGLLDKFGKPN 393

Query: 296 ENTPKEWLNSYVNYN----VKKEPENGDGVEEGSRKRTASTANAEDPD 165
           + TPK W   YV  +    VKKE    +  EE  +K++  +   E  D
Sbjct: 394 DTTPKSWAKEYVQTSTKKEVKKEETPDEEEEEAPKKKSKKSKKQESSD 441


>U23517-9|AAB93334.2|  314|Caenorhabditis elegans Ubiquitin
           conjugating enzyme protein6 protein.
          Length = 314

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -3

Query: 302 PNENTPKEWLNSYVNYNVKKEPENGDGVEEGSRKRTASTANAEDPDVS 159
           P E  P E  +S    NV++  E+ D  EEG+   T +  ++E PDV+
Sbjct: 203 PTETEPSEETSSVPTENVEESEEDADEREEGT---TVNVNSSEVPDVA 247


>U80838-6|AAC71115.1|  169|Caenorhabditis elegans Hypothetical
           protein F47F6.4 protein.
          Length = 169

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 240 FFLNIIVDVTV*PFFWCVLIWFAIFVKF 323
           F  N  ++  V PF W V  WFA  V++
Sbjct: 108 FSANFNIEFKVLPFMWTVCYWFAPLVEY 135


>U80028-10|AAN73868.2|  376|Caenorhabditis elegans Serpentine
           receptor, class w protein139 protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 268 VTSTIMLRKNRRMVTVSRKAAESERQAQL 182
           VT  +++ KNRR ++ S+ +AES R   L
Sbjct: 246 VTQLLLVNKNRRSISSSKSSAESLRTTHL 274


>Z82274-8|CAB05230.3|  467|Caenorhabditis elegans Hypothetical
           protein JC8.2 protein.
          Length = 467

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
 Frame = -3

Query: 359 KASQKKILIQQGKLDKYGKPNENT-PKEWLNSYVNYNVKKEPENGDGVEEGSRKRTASTA 183
           ++  +K+   +G+ D   K  E+   K+++  Y N N+K EPE  DG++  +   T    
Sbjct: 55  ESDNEKLKGLRGRGDVEMKDEESEFEKKYMKGY-NENIKDEPEGQDGMKGIAMYST---- 109

Query: 182 NAEDPDVSIEV 150
           N +DP V+ +V
Sbjct: 110 NKDDPYVTEQV 120


>Z80789-1|CAB02551.1|  708|Caenorhabditis elegans Hypothetical
           protein F48C11.2 protein.
          Length = 708

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = -3

Query: 308 GKPNENTPKEWLNSYVNYNVKKEPENGDGVEEGSRKRTAS---TANAEDPDVS 159
           GKPN  TPK    S +    + E ENG  +    R+R AS     N + P++S
Sbjct: 536 GKPNNGTPKRMTFSPI--ADESEEENGARIPSPPRERRASGGRPGNNDGPNLS 586


>U23139-6|AAK31489.2|  520|Caenorhabditis elegans Hypothetical
           protein F13H8.8 protein.
          Length = 520

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = -1

Query: 397 NETRTPENGVSDRKPHRKKSSYNKGNLTNMANQMRTHQKNG*TVTSTIMLRKNRRM-VTV 221
           ++ R  + G  +RK H+K++S N      + + + +   N          +K +R+ V  
Sbjct: 168 SDVRKAQQGSDERKKHKKQNSKNLSK-EQIRSLVASPAANVDKTLENFASKKGKRLSVVK 226

Query: 220 SRKAAESERQAQLTQKIPMSP 158
           S ++A+       T+K P SP
Sbjct: 227 SAESAKKTPTVDSTKKPPPSP 247


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,320,884
Number of Sequences: 27780
Number of extensions: 301743
Number of successful extensions: 921
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)