Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_B13
         (783 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p...    29   2.8  
Z81588-3|CAB04715.2|  377|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AL031624-2|CAA20942.1|  244|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z93383-9|CAB07630.1|  281|Caenorhabditis elegans Hypothetical pr...    28   8.7  
U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical pr...    28   8.7  

>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
           protein F45G2.2a protein.
          Length = 1235

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 329 TEYWCTAQDVFYTPGFSAQMSYDRFRLLSRCLHFSNNT 216
           TE W      F   GFS +   D ++L S  +H  N+T
Sbjct: 319 TEEWQITDGAFNVMGFSEREKDDLYKLCSAIMHIGNST 356


>Z81588-3|CAB04715.2|  377|Caenorhabditis elegans Hypothetical
           protein T07D10.3 protein.
          Length = 377

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 447 LQHDRCQLLCVNVGFLDYR 503
           L+H  CQL C  V F DY+
Sbjct: 111 LEHQSCQLFCCGVRFSDYK 129


>AL031624-2|CAA20942.1|  244|Caenorhabditis elegans Hypothetical
           protein H16D19.3 protein.
          Length = 244

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 447 LQHDRCQLLCVNVGFLDYR 503
           L+H  CQL C  V F DY+
Sbjct: 99  LEHQSCQLFCCGVRFSDYK 117


>Z93383-9|CAB07630.1|  281|Caenorhabditis elegans Hypothetical
           protein F54B8.10 protein.
          Length = 281

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
 Frame = -2

Query: 344 IKSCLTEYWCTAQDVFY-TPGFSAQMSYDRFRLLSRCLHFSNN----TACDLAMLTRRQV 180
           +  C  +YW     +FY   G ++ + + R  + + C    +N     A  +A+L     
Sbjct: 164 VNQCYQDYWVVHDQLFYFLIGAASILLFFRLCIWNHCATTQSNLLLSRATQIALLDAFMT 223

Query: 179 KLYKIQPLIDHLNKKFAELYNLGQNLAVDES 87
            ++ I PL  + N     L  +G   +V ++
Sbjct: 224 LIFNIIPLFVYANFPSINLKTVGPMTSVSKT 254


>U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical
           protein T07F8.1 protein.
          Length = 822

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 80  SSNFHPLLNFDPNCKVPQIFYL 145
           S+ +HPLL+ +P C VP   +L
Sbjct: 437 SAGYHPLLHIEPFCIVPPCLHL 458


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,840,708
Number of Sequences: 27780
Number of extensions: 385527
Number of successful extensions: 852
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)