Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_B04
         (813 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    23   2.5  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           23   4.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.9  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   5.9  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    22   7.8  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    22   7.8  

>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -1

Query: 237 NNTACSANCSAGGEECGLGS--GCPSEQTHF 151
           N++AC+ANC + G+  G     GC   +T F
Sbjct: 56  NDSACAANCLSLGKAGGHCEKVGCICRKTSF 86


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 237 NNTACSANCSAGGEECG 187
           N++AC+ANC + G+  G
Sbjct: 31  NDSACAANCHSLGKAGG 47


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 498 KCTCDDGYRLSPEDP 454
           +C CD GY  + +DP
Sbjct: 295 ECRCDPGYFRAEKDP 309


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 237 NNTACSANCSAGGEECG 187
           N++AC+ANC + G+  G
Sbjct: 56  NDSACAANCLSLGKAGG 72


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 366 RNDTNSNVCYKKCDGACE 313
           R    SN  + +CDG C+
Sbjct: 34  RGKCPSNEIFSRCDGRCQ 51


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 366 RNDTNSNVCYKKCDGACE 313
           R    SN  + +CDG C+
Sbjct: 34  RGKCPSNEIFSRCDGRCQ 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,147
Number of Sequences: 438
Number of extensions: 4918
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)