Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_T7_A02
         (896 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    31   1.6  
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    30   2.9  
02_04_0400 - 22608519-22608844,22609044-22609122                       30   2.9  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   3.8  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   6.6  

>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/80 (22%), Positives = 23/80 (28%)
 Frame = +3

Query: 612 PPPXGPXXXXXVFFXKKXRPPPXXFCFFXAGGXXPXXXXXKXNPPXPXXXRPPPXLRXXX 791
           PPP  P         ++ +PPP    ++      P        PP P    P P      
Sbjct: 63  PPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPP 122

Query: 792 XXPXXPXXXXXXXXXXXPPP 851
             P  P           PPP
Sbjct: 123 PPPPPPTQPPPREAQLAPPP 142



 Score = 29.1 bits (62), Expect = 5.0
 Identities = 22/83 (26%), Positives = 24/83 (28%)
 Frame = +3

Query: 612 PPPXGPXXXXXVFFXKKXRPPPXXFCFFXAGGXXPXXXXXKXNPPXPXXXRPPPXLRXXX 791
           PPP G       F      PPP        G   P        P  P   +PPP  +   
Sbjct: 42  PPPQGAPPP---FLAPPPPPPP--------GPPPPHQPQFNFGPGPPQQQQPPPPPQMYY 90

Query: 792 XXPXXPXXXXXXXXXXXPPPGPP 860
             P  P           PPP PP
Sbjct: 91  QPPPPPPPYGVNSSQPPPPPPPP 113


>03_02_0455 -
           8630543-8630893,8630994-8631068,8631149-8631223,
           8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 19/70 (27%), Positives = 21/70 (30%), Gaps = 4/70 (5%)
 Frame = +3

Query: 666 RPPPXXFCFFXAGGXXPXXXXXKXNPPXPXXXRPPPXLRXXXXXPXXPXXXXXXXXXXXP 845
           +PP          G  P     +  PP P    PPP        P  P           P
Sbjct: 249 KPPAAPGTLPNGSGGPPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPP 308

Query: 846 PP----GPPR 863
           PP    GPPR
Sbjct: 309 PPPLANGPPR 318


>02_04_0400 - 22608519-22608844,22609044-22609122
          Length = 134

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/53 (30%), Positives = 18/53 (33%)
 Frame = -2

Query: 859 GGPGGGXXXXXXXXXCXGXXGXXXXXRXXGGGRXXXGXGGXFFXXXXXGXXPP 701
           GG GGG           G  G        GGG    G GG ++     G  PP
Sbjct: 52  GGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGYYPPWNGGYYPP 104


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 17/54 (31%), Positives = 18/54 (33%)
 Frame = +3

Query: 714 PXXXXXKXNPPXPXXXRPPPXLRXXXXXPXXPXXXXXXXXXXXPPPGPPRXXAS 875
           P     K  PP P    PPP        P  P           PPP PP+  AS
Sbjct: 336 PPPPPPKGPPPPPPAKGPPPP--PPPKGPSPPPPPPPGGKKGGPPPPPPKGGAS 387


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 22/83 (26%), Positives = 25/83 (30%)
 Frame = +3

Query: 612 PPPXGPXXXXXVFFXKKXRPPPXXFCFFXAGGXXPXXXXXKXNPPXPXXXRPPPXLRXXX 791
           PPP  P      +   +  PPP            P       +PP P    PPP L    
Sbjct: 568 PPPPPPPLPQSNYASSQPPPPPPP---------PPLPNCLVPSPPPP--PPPPPILPNRS 616

Query: 792 XXPXXPXXXXXXXXXXXPPPGPP 860
             P  P           PPP PP
Sbjct: 617 VPPPPPPPPPLPNHSVLPPPPPP 639


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,738,122
Number of Sequences: 37544
Number of extensions: 328006
Number of successful extensions: 999
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)