Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_T7_A01
(852 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.010
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.039
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.051
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.12
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.16
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.48
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 0.63
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 25 0.77
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 28 1.5
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 1.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.9
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 2.6
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 4.5
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 5.9
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 6.7
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.5 bits (78), Expect = 0.010
Identities = 24/79 (30%), Positives = 26/79 (32%)
Frame = +1
Query: 559 PXAPPPXXXXXSPPQXPXXQXAXXTXXRXXXAXSPXXXXXXXFXSSXPXAPPXPPSSPXX 738
P APPP S P P A T + P S+ P PP P S
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRT------STPPVPTPPSLPPSAPPSLPPSAPPSLPM 441
Query: 739 XPPXXPPHPPXTPXXXATP 795
P PP PP P P
Sbjct: 442 GAPAAPPLPPSAPIAPPLP 460
Score = 35.5 bits (78), Expect = 0.010
Identities = 24/88 (27%), Positives = 25/88 (28%)
Frame = +2
Query: 524 PPAXXRXXXAGXPXPPPPXXXXXPPPKXPXXXAPXPPXXVPXXPXLPXXXXXXXXXXXXX 703
PP + P P PP PP P P P P P LP
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP--PSAPIAPPLPA 461
Query: 704 XXXXXXPXPPXXXLXTXPXTPPXPPPXP 787
P PP P PP P P P
Sbjct: 462 GMPAAPPLPP-----AAPAPPPAPAPAP 484
Score = 29.5 bits (63), Expect = 0.63
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 8/56 (14%)
Frame = +2
Query: 512 PTPAPPAXXRXXXAGXPXPP-----PPXXXXXP--PPKXPXXXAPXP-PXXVPXXP 655
P APP+ A P PP PP P PP P AP P P P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +1
Query: 706 APPXPPSSPXXXPPXXPPHPPXTPXXXATPXTXXXXHTPPS 828
APP PPS P PP P P + +PP+
Sbjct: 229 APPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPN 269
Score = 27.9 bits (59), Expect = 1.9
Identities = 26/96 (27%), Positives = 27/96 (28%), Gaps = 2/96 (2%)
Frame = +2
Query: 518 PAPPAXXRXXXAGXPXPPPPXXXXXPPPKXPXXXAPXPPXXVPXXPXLPXXXXXXXXXXX 697
P PP R AG PP PPP P AP P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPP--PPRSAPSTGRQPP--PLSSSRAVSNPPAPP 392
Query: 698 XXXXXXXXPXPPXXXLXTXPXTP--PXPPPXPPRXP 799
P P + TP P PP PP P
Sbjct: 393 PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP 428
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/55 (29%), Positives = 18/55 (32%), Gaps = 4/55 (7%)
Frame = +2
Query: 512 PTPAPPAXXRXXXAGXPXPPPPXXXXXPPPKXPXXX----APXPPXXVPXXPXLP 664
P P PP+ P PP P P AP P +P P LP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +2
Query: 560 PXPPPPXXXXXPPPKXPXXXAPXPPXXVP 646
P PP PP + P AP PP P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPP 258
Score = 26.6 bits (56), Expect = 4.5
Identities = 21/81 (25%), Positives = 24/81 (29%), Gaps = 4/81 (4%)
Frame = +1
Query: 595 PPQXPXXQXAXXTXXRXXXAXSPXXXXXXXFXSSXPXAPPXP--PSS--PXXXPPXXPPH 762
PP P + A P SS P +PP P P S P PP
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPL 292
Query: 763 PPXTPXXXATPXTXXXXHTPP 825
PP + A PP
Sbjct: 293 PPPSSRVSAAALAANKKRPPP 313
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.5 bits (73), Expect = 0.039
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = +2
Query: 491 SPXXXXDPTPAPPAXXRXXXAGXPXPPPPXXXXXPPPKXPXXXAPXPPXXVPXXP 655
+P P P P PPPP PPP P A P P P
Sbjct: 1682 APAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 25.8 bits (54), Expect = 7.8
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +2
Query: 569 PPPXXXXXPPPKXPXXXAPXPPXXVPXXPXLP 664
PP PP+ P PP VP P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP 1721
Score = 25.8 bits (54), Expect = 7.8
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = +1
Query: 706 APPXPPSSPXXXPPXXPPHPPXTPXXXATPXTXXXXHTPPS 828
APP + PP P PP P A P + P S
Sbjct: 1698 APPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS 1738
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.1 bits (72), Expect = 0.051
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 691 SSXPXAPPXPPSSPXXXPPXXPPHPP 768
S P PP PP P PP PP PP
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2
Query: 554 GXPXPPPPXXXXXPPPKXPXXXAPXPPXXV 643
G P PPPP PP + P P PP V
Sbjct: 7 GNPPPPPPPPGFEPPSQPP---PPPPPGYV 33
Score = 26.2 bits (55), Expect = 5.9
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +2
Query: 722 PXPPXXXLXTXPXTPPXPPPXPPRXPXXRSXTP 820
P PP P + P PPP P ++ TP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.12
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = +2
Query: 512 PTPAPPAXXRXXXAGXPXPPPPXXXXX----PPPKXPXXXAPXPPXXVPXXP 655
P P PPA A P P PP PPP P PP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.9 bits (64), Expect = 0.48
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 700 PXAPPXPPSSPXXXPPXXPPHPP 768
P PP PP PP PP PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.84
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 494 PXXXXDPTPAPPAXXRXXXAGXPXPPPPXXXXXPPPKXPXXXA 622
P P P PP P PPP PPP P A
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 709 PPXPPSSPXXXPPXXPPHPPXTPXXXA 789
PP PP P PP PP P A
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSA 787
Score = 26.2 bits (55), Expect = 5.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 700 PXAPPXPPSSPXXXPPXXPPHPP 768
P P PP +P P PP PP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPP 768
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.16
Identities = 27/116 (23%), Positives = 27/116 (23%), Gaps = 7/116 (6%)
Frame = +2
Query: 494 PXXXXDPTPAPPAXXRXXXAGXPXPPPPXXXXXPPPKXPXXXAP-------XPPXXVPXX 652
P P PAP PP P PP P AP PP P
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSV 1166
Query: 653 PXLPXXXXXXXXXXXXXXXXXXXPXPPXXXLXTXPXTPPXPPPXPPRXPXXRSXTP 820
P P PP P PP PP TP
Sbjct: 1167 AAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 30.3 bits (65), Expect = 0.36
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +2
Query: 512 PTPAPPAXXRXXXAGXPXPPPPXXXXXPPPKXPXXXAPXPPXXVPXXPXLP 664
P PAP + A PP P PP P AP P P +P
Sbjct: 1065 PVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVP 1115
Score = 29.1 bits (62), Expect = 0.84
Identities = 16/58 (27%), Positives = 18/58 (31%)
Frame = +2
Query: 491 SPXXXXDPTPAPPAXXRXXXAGXPXPPPPXXXXXPPPKXPXXXAPXPPXXVPXXPXLP 664
+P P P P A PP P PP P AP P P +P
Sbjct: 1173 APSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 27.5 bits (58), Expect = 2.6
Identities = 25/99 (25%), Positives = 28/99 (28%), Gaps = 3/99 (3%)
Frame = +2
Query: 512 PTPAPPAXXRXXXAGXPXPPPPXXXXXPPPKXPXXXAP--XPPXXVP-XXPXLPXXXXXX 682
PT PP +G P PPP P + P AP PP P P +P
Sbjct: 1046 PTSTPPVP--KSSSGAPSAPPP--VPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAA 1101
Query: 683 XXXXXXXXXXXXXPXPPXXXLXTXPXTPPXPPPXPPRXP 799
P P P P P P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = +2
Query: 512 PTPAPPAXXRXXXAGXPXPPPPXXXXXPPPKXPXXXAPXPPXXVPXXP 655
P+ APP + P PPP P P P P P P
Sbjct: 1194 PSEAPPVP-KPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +2
Query: 512 PTPAPPAXXRXXXAGXPXPPPPXXXXXPPPKXPXXXAPXPPXXVP 646
P P P A PP P PP AP P VP
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP 1067
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 0.48
Identities = 20/80 (25%), Positives = 24/80 (30%)
Frame = +2
Query: 560 PXPPPPXXXXXPPPKXPXXXAPXPPXXVPXXPXLPXXXXXXXXXXXXXXXXXXXPXPPXX 739
P PP P PP P + PP P +P P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPS-IPPPSPASAPPIP----SKAPPIPSSLPPPAQPAAPVK 182
Query: 740 XLXTXPXTPPXPPPXPPRXP 799
+ P P PP PP+ P
Sbjct: 183 SPPSAPSLPSAVPPMPPKVP 202
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/46 (30%), Positives = 16/46 (34%)
Frame = +1
Query: 691 SSXPXAPPXPPSSPXXXPPXXPPHPPXTPXXXATPXTXXXXHTPPS 828
+S P P PP SP PP PP +PPS
Sbjct: 141 TSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPS 186
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +1
Query: 706 APPXPPSSPXXXPPXXP--PHPPXTPXXXATPXTXXXXHTPPS 828
+PP PS P PP P P PP + A + PP+
Sbjct: 183 SPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPA 225
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = +2
Query: 494 PXXXXDPTPAPPAXXRXXXAGXPXPPPPXXXXXPPPKXPXXXAPXPP 634
P P P+ P P PP PPP P PP
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 26.2 bits (55), Expect = 5.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 700 PXAPPXPPSSPXXXPPXXPPHPPXTP 777
P AP P S P PP PP P
Sbjct: 177 PAAPVKSPPSAPSLPSAVPPMPPKVP 202
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 560 PXPPPPXXXXXPPPKXPXXXAPXPP 634
P PPPP PP P AP PP
Sbjct: 3 PAPPPP-----PPAPAPAAAAPAPP 22
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.5 bits (63), Expect = 0.63
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -1
Query: 663 GRXGXXGTXXGGXGALXXGXLGGGXXXXXGGGGXGXPAXXXRXXAGG 523
G G G GG G G GGG GGG G R + G
Sbjct: 142 GFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRG 188
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 776 GVXGGXGGXXGGXXXGXEGGXGG 708
G GG GG GG GG GG
Sbjct: 142 GFRGGRGGSRGGFGGNSRGGFGG 164
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 25.0 bits (52), Expect(2) = 0.77
Identities = 16/50 (32%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = -1
Query: 633 GGXGA-LXXGXLGGGXXXXXGGGGXGXPAXXXRXXAGGAGVGSXXXXGEV 487
GG G G + GG GGGG G A GG+ EV
Sbjct: 157 GGFGTRTRGGGMPGGFANMFGGGGAGPHARRSHPSFGGSRPSQPPAQNEV 206
Score = 22.6 bits (46), Expect(2) = 0.77
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 789 GGXGGGXGGVXG 754
GG GGG GG+ G
Sbjct: 137 GGMGGGMGGMGG 148
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 694 SXPXAPPXPPSSPXXXPPXXPPHP 765
S P PP P PP PPHP
Sbjct: 159 SCPPFPPTQHHHPHTRPPHHPPHP 182
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = -3
Query: 622 RXAGGXLGGGXXGXXXG-GGXXAPGXXXPXXGRGGRGWIXXXXWGGXRGWSG 470
R G GG G G GG G GRGGRG G G G
Sbjct: 15 RGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 798 GXRGGXGGGXGGVXGXVWRXXXGGXG 721
G RGG GGG GG G GG G
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRG 48
Score = 27.5 bits (58), Expect = 2.6
Identities = 22/68 (32%), Positives = 23/68 (33%)
Frame = -1
Query: 798 GXRGGXGGGXGGVXGXVWRXXXGGXGXXXXXXXXXXXXGXXXXXXGRXGXXGTXXGGXGA 619
G RGG GG GG G + GG G G GR G G G G
Sbjct: 6 GSRGGRGGSRGGRGG--FNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Query: 618 LXXGXLGG 595
G GG
Sbjct: 64 -RGGAKGG 70
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Frame = -2
Query: 776 GVXGGXGGXXGGXXXGXEGGX---GGAXG 699
G GG GG GG G GG GGA G
Sbjct: 27 GFGGGRGGARGGGRGGARGGRGGRGGARG 55
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +1
Query: 700 PXAPPXPPSSPXXXPPXXPPHPPXTPXXXATP 795
P A P PP++P P PP T TP
Sbjct: 899 PVAEPAPPAAPAKEVVEKAPSPPATRPKSTTP 930
Score = 27.1 bits (57), Expect = 3.4
Identities = 21/90 (23%), Positives = 22/90 (24%), Gaps = 3/90 (3%)
Frame = +2
Query: 566 PPP---PXXXXXPPPKXPXXXAPXPPXXVPXXPXLPXXXXXXXXXXXXXXXXXXXPXPPX 736
PPP P P P P PP P PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPT 226
Query: 737 XXLXTXPXTPPXPPPXPPRXPXXRSXTPHL 826
P PPP PP P + T L
Sbjct: 227 YTPKQADPLPAPPPPPPPTLPPQSTNTSQL 256
Score = 24.6 bits (51), Expect(2) = 1.9
Identities = 12/40 (30%), Positives = 12/40 (30%)
Frame = +2
Query: 524 PPAXXRXXXAGXPXPPPPXXXXXPPPKXPXXXAPXPPXXV 643
PP P PPPP PP P P V
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNV 263
Score = 21.4 bits (43), Expect(2) = 1.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 764 PPXPPPXPPRXPXXRS 811
PP P PPR P S
Sbjct: 275 PPATPSQPPRPPTNAS 290
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 776 GVXGGXGGXXGGXXXGXEGGXGGAXG 699
G GG GG G G GG GG G
Sbjct: 448 GSRGGRGGFGGRGGFGGRGGFGGGRG 473
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.6 bits (56), Expect = 4.5
Identities = 26/92 (28%), Positives = 26/92 (28%)
Frame = -1
Query: 792 RGGXGGGXGGVXGXVWRXXXGGXGXXXXXXXXXXXXGXXXXXXGRXGXXGTXXGGXGALX 613
RG GGG GG G G G G G G GG G
Sbjct: 183 RGHNGGGFGGFGG--------GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFE 234
Query: 612 XGXLGGGXXXXXGGGGXGXPAXXXRXXAGGAG 517
G G G GGG G GG G
Sbjct: 235 GGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPG 266
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.2 bits (55), Expect = 5.9
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +2
Query: 491 SPXXXXDPTPAPPAXXRXXXAGXPXPPPPXXXXXPPPKXP 610
SP TPAPP PPPP P P
Sbjct: 720 SPAIKPQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 22.6 bits (46), Expect(2) = 6.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 743 LXTXPXTPPXPPPXP 787
+ T P TPP PPP P
Sbjct: 901 IITHP-TPPPPPPLP 914
Score = 21.4 bits (43), Expect(2) = 6.7
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 764 PPXPPPXPPRXP 799
P PPP PP P
Sbjct: 942 PAFPPPPPPPPP 953
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.133 0.447
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,718,584
Number of Sequences: 5004
Number of extensions: 22069
Number of successful extensions: 352
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 422462090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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