Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_P22
         (818 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0106 + 14842748-14843085,14843122-14843250,14844145-148442...    31   1.1  
03_05_0362 + 23455372-23455619,23456570-23456966,23457400-23457561     31   1.5  
12_02_0667 + 21682386-21682944,21683042-21683201,21683419-216834...    30   1.9  
04_04_1541 + 34249778-34249882,34249964-34250115,34250225-342503...    30   2.5  
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037...    29   4.4  
11_01_0022 + 151233-151515,152632-152852,153579-153656,154558-15...    29   5.9  
03_05_0431 + 24221881-24224586                                         29   5.9  
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626...    28   7.8  

>10_08_0106 +
           14842748-14843085,14843122-14843250,14844145-14844211,
           14847177-14847324,14847998-14848097,14848306-14848384,
           14848527-14848687,14848829-14848908,14849319-14849475,
           14849575-14849723,14849909-14850076,14850426-14850719,
           14851002-14851046,14851213-14851462,14851707-14851835,
           14852799-14853039,14853977-14854642
          Length = 1066

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +3

Query: 105 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEHHFEHPTP 245
           SS   DRS+ P    P+  +R  PH + SG+ +K S S+ + + P P
Sbjct: 849 SSQPADRSAPPPPASPDRHSRRSPH-RSSGSGKKRSSSDRYDDLPLP 894


>03_05_0362 + 23455372-23455619,23456570-23456966,23457400-23457561
          Length = 268

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -3

Query: 774 ATSTVTIRXTGSGMXFPAXTMRGFSCRPA 688
           +T+T T+    SG    A T RG SCRPA
Sbjct: 161 STTTTTVSSNESGSSSVASTPRGMSCRPA 189


>12_02_0667 +
           21682386-21682944,21683042-21683201,21683419-21683467,
           21683570-21683683,21683794-21684294,21684594-21684980,
           21685074-21685172,21685380-21685478,21685817-21685890,
           21686387-21687023
          Length = 892

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -3

Query: 294 AKESDGTNGGGVCAPTTEW---DARSDVRRATPFEE 196
           ++E  G  GGG   P  ++   D+RS  RR+T F+E
Sbjct: 3   SREESGNGGGGGATPAADYRSSDSRSSSRRSTRFKE 38


>04_04_1541 +
           34249778-34249882,34249964-34250115,34250225-34250350,
           34251868-34252030,34252601-34252678,34252749-34252847,
           34253045-34253188,34253344-34253446,34255303-34255646,
           34255727-34255891
          Length = 492

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 610 IPKEPKALRRLSCRIVIE*PEG 545
           +P+EPK  R L CR+ I  P+G
Sbjct: 403 LPEEPKGSRELLCRVAIRLPDG 424


>04_04_0233 +
           23801944-23802598,23802914-23803047,23803548-23803730,
           23804145-23804318
          Length = 381

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
 Frame = +1

Query: 79  YSCRKMSLLHRRLQIA----VATLGQWFRKWRIDINPTKSAAVLFKRGR 213
           +S     L+HR L  A    VA   +  R WR  + P + AA L  RGR
Sbjct: 89  FSALPPELVHRALAAAGASDVAAASRACRAWRDALRPLREAAALHARGR 137


>11_01_0022 +
           151233-151515,152632-152852,153579-153656,154558-154674,
           155970-156316,156504-157032
          Length = 524

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 555 NLKGFQVGAGCVSEHYACVR 496
           N   +QVG GC+S+ Y C+R
Sbjct: 348 NATNYQVGTGCLSDIYFCLR 367


>03_05_0431 + 24221881-24224586
          Length = 901

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -1

Query: 392 ARSRTVFIWG-RNVIPLSRVTPRYLTFETHGMG 297
           AR+RTVF WG  +V  +  + PR + F++ G G
Sbjct: 175 ARNRTVFCWGDESVSGVIGLAPRNVRFQSIGAG 207


>10_08_0683 -
           19860777-19861070,19861677-19861874,19862498-19862659,
           19862763-19862911,19863089-19863236,19863317-19863385,
           19863471-19863719,19863937-19864131,19864444-19864560,
           19864978-19866537
          Length = 1046

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = +3

Query: 114 TPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEHHFEHPTP 245
           +P RS H     P    + QP+   S  LQ   P   H  +P P
Sbjct: 45  SPSRSFHGYPSAPPPQPQPQPYAHHSAPLQPYPPPPQHHAYPPP 88


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,642,074
Number of Sequences: 37544
Number of extensions: 536502
Number of successful extensions: 1457
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1455
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)