Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_P22
(818 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 49 5e-06
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 43 3e-04
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 43 3e-04
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 40 0.003
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 36 0.046
Z78061-1|CAB01494.1| 658|Caenorhabditis elegans Hypothetical pr... 28 9.2
AL137227-6|CAB70236.2| 159|Caenorhabditis elegans Hypothetical ... 28 9.2
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 48.8 bits (111), Expect = 5e-06
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 2/192 (1%)
Frame = +1
Query: 7 LYINDIPRSPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPT 180
+Y+NDI +A FADDT +Y S K LQ A+ + W + ++ +N +
Sbjct: 90 IYVNDISSILPEKVACKQFADDTKLYASTPKTES-ENNLQSALDAVVDWTKGSKLTLNQS 148
Query: 181 KSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTF 360
K T + + RR + L G PI + + LG + + F
Sbjct: 149 K--------------TVHVTVGKRRIDFK----YHLDGYPIERKAITRDLGFLISEKLDF 190
Query: 361 RPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTHL 540
H + + A F L ++ + +K + + LYKT IRP + Y +VV + ++
Sbjct: 191 SDHWRKCINLAKFQLANMFNKYSTSNKKLM---ILLYKTFIRPRLEYGTVVSSPTKKSDE 247
Query: 541 KSLQVIQSRFCR 576
K+++ +Q+ F R
Sbjct: 248 KTIESVQNAFTR 259
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/97 (27%), Positives = 48/97 (49%)
Frame = +1
Query: 286 LFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVT 465
L G PI + + LG + + F H K + A F L ++ + +K + +
Sbjct: 136 LDGYPIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---IL 192
Query: 466 LYKTCIRPVMTYASVVFAHAARTHLKSLQVIQSRFCR 576
LYKT IRP + Y +VV + ++ K+++ +Q+ F R
Sbjct: 193 LYKTFIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 42.7 bits (96), Expect = 3e-04
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Frame = +1
Query: 7 LYIND--IPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPT 180
L+IN+ I +P +++ FADD I+++ +++ + I V+ W + + + PT
Sbjct: 894 LFINNLLIDLAPTINISCFADDVKIFHT--DPTIIQNSIDIIVS----WSKLNELPLAPT 947
Query: 181 KSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTF 360
KSA + L +R N S ++ G PI S V+ LG+ D + F
Sbjct: 948 KSAL--------------LALGTRNKNQS----YSVDGVPITPSSTVRDLGLITDCKLKF 989
Query: 361 RPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFA 519
HI V + + R +L + S S + LYKT + P+M Y S V+A
Sbjct: 990 EHHIVKV---SCLAMLRSKQILKAFSSNSPKFYAHLYKTYVAPIMNYCSEVYA 1039
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +1
Query: 298 PIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKT 477
PI + + LG+ D +TF+PHIK + + L R +L S L L+KT
Sbjct: 188 PISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLRCKQLLKSFKSLCPEFYCNLFKT 244
Query: 478 CIRPVMTYASVVFAHAARTHLKSL 549
I P++ Y S V++ + L +L
Sbjct: 245 YILPLIEYGSAVYSPKPSSSLSTL 268
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 35.5 bits (78), Expect = 0.046
Identities = 27/121 (22%), Positives = 53/121 (43%)
Frame = +1
Query: 10 YINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSA 189
Y+ D+P +T L +ADD +I +K+ ++Q+ + + ++ ++ + I+ KS
Sbjct: 547 YLKDMPTQQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISAEKST 606
Query: 190 AVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPH 369
+F S P + I PIP ++ K LG+TL+ + H
Sbjct: 607 VTVF---------SCDPKEHK-----TKPDIYWMDDPIPVINAPKLLGITLNTMTGTKDH 652
Query: 370 I 372
+
Sbjct: 653 V 653
>Z78061-1|CAB01494.1| 658|Caenorhabditis elegans Hypothetical
protein C48G7.1 protein.
Length = 658
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 447 PPQ*GNSLQNLHTPRHDVRKRSVRSRSPHPLEIPSGYSITILQDSRRSALGSL 605
PP + L ++H R D R +SVRS G+S + RS L SL
Sbjct: 204 PPSKHDRLDDVHISRSDRRSQSVRSHKSVTASPKLGHSTSSTLSRPRSFLRSL 256
>AL137227-6|CAB70236.2| 159|Caenorhabditis elegans Hypothetical
protein F58D5.5 protein.
Length = 159
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +3
Query: 432 SKQTVPPQ*GNSLQNLHTPRHDVRKRSVRSRSPHPLEIPSGYSITILQDSRRSAL 596
S QT P GN Q PRH R+R +S SP L + S+ +R L
Sbjct: 26 SHQTTPKSSGNPRQQQAQPRH--RQRKAQSSSPASLAAFASSSVCSSPSARNVPL 78
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,575,136
Number of Sequences: 27780
Number of extensions: 405869
Number of successful extensions: 1173
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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