Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_P16
         (818 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.9  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          23   4.5  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          23   4.5  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          23   4.5  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          23   4.5  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    23   4.5  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   7.8  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   7.8  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   7.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   7.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   7.8  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 20/71 (28%), Positives = 24/71 (33%)
 Frame = +3

Query: 513 SQCAPVCPDGYYNDPVECSPRCERCVNGTCTEPGLCTCDSGYKNIDDVCVPQCLDCRNGE 692
           S C+  C  G     V     C  C N  CT+         Y+  D   V QC+ CR G 
Sbjct: 585 SVCSLPCEVGQAKKYVAGEQCCWHCFN--CTQ---------YQIRDHKDVTQCISCRQGT 633

Query: 693 CVAPNDCLCHD 725
                   C D
Sbjct: 634 VPDETHSACRD 644


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 22/96 (22%), Positives = 39/96 (40%)
 Frame = +2

Query: 122 CHKRWERSCHRGRTGHKATHSFGLQ*EKMSRQD*QRLVRYNRIIREHWEESIMQDWLDIR 301
           CH R+E S H  R  ++         ++ SR+  ++  RY+++   + EE  +++    R
Sbjct: 230 CHSRYEDSRHEDRNSYRNDGERSCSRDR-SREYKKKDRRYDQL--HNVEEKHLRERTSRR 286

Query: 302 GEDRQLCTEMHERVRERNLRGARGVHLSRASGPQTR 409
              R    E      ER  R  R     R+   + R
Sbjct: 287 RYSRSREREQKSYKNEREYREYRETSRERSRDRRER 322


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 22/96 (22%), Positives = 39/96 (40%)
 Frame = +2

Query: 122 CHKRWERSCHRGRTGHKATHSFGLQ*EKMSRQD*QRLVRYNRIIREHWEESIMQDWLDIR 301
           CH R+E S H  R  ++         ++ SR+  ++  RY+++   + EE  +++    R
Sbjct: 230 CHSRYEDSRHEDRNSYRNDGERSCSRDR-SREYKKKDRRYDQL--HNVEEKHLRERTSRR 286

Query: 302 GEDRQLCTEMHERVRERNLRGARGVHLSRASGPQTR 409
              R    E      ER  R  R     R+   + R
Sbjct: 287 RYSRSREREQKSYKNEREYREYRETSRERSRDRRER 322


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 22/96 (22%), Positives = 39/96 (40%)
 Frame = +2

Query: 122 CHKRWERSCHRGRTGHKATHSFGLQ*EKMSRQD*QRLVRYNRIIREHWEESIMQDWLDIR 301
           CH R+E S H  R  ++         ++ SR+  ++  RY+++   + EE  +++    R
Sbjct: 230 CHSRYEDSRHEDRNSYRNDGERSCSRDR-SREYKKKDRRYDQL--HNVEEKHLRERTSRR 286

Query: 302 GEDRQLCTEMHERVRERNLRGARGVHLSRASGPQTR 409
              R    E      ER  R  R     R+   + R
Sbjct: 287 RYSRSREREQKSYKNEREYREYRETSRERSRDRRER 322


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 22/96 (22%), Positives = 39/96 (40%)
 Frame = +2

Query: 122 CHKRWERSCHRGRTGHKATHSFGLQ*EKMSRQD*QRLVRYNRIIREHWEESIMQDWLDIR 301
           CH R+E S H  R  ++         ++ SR+  ++  RY+++   + EE  +++    R
Sbjct: 230 CHSRYEDSRHEDRNSYRNDGERSCSRDR-SREYKKKDRRYDQL--HNVEEKHLRERTSRR 286

Query: 302 GEDRQLCTEMHERVRERNLRGARGVHLSRASGPQTR 409
              R    E      ER  R  R     R+   + R
Sbjct: 287 RYSRSREREQKSYKNEREYREYRETSRERSRDRRER 322


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 22/96 (22%), Positives = 39/96 (40%)
 Frame = +2

Query: 122 CHKRWERSCHRGRTGHKATHSFGLQ*EKMSRQD*QRLVRYNRIIREHWEESIMQDWLDIR 301
           CH R+E S H  R  ++         ++ SR+  ++  RY+++   + EE  +++    R
Sbjct: 230 CHSRYEDSRHEDRNSYRNDGERSCSRDR-SREYKKKDRRYDQL--HNVEEKHLRERTSRR 286

Query: 302 GEDRQLCTEMHERVRERNLRGARGVHLSRASGPQTR 409
              R    E      ER  R  R     R+   + R
Sbjct: 287 RYSRSREREQKSYKNEREYREYRETSRERSRDRRER 322


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +2

Query: 548 QRSRGVLPAVRALRQRHVHGARPMH 622
           Q+ +  + AV+  +QRH H A+ ++
Sbjct: 780 QQMQAAMAAVQQSQQRHQHAAQMIY 804


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 122 CHKRWERSCHRGRTGHK 172
           CH R+E S H  R  ++
Sbjct: 230 CHSRYEDSRHEDRNSYR 246


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 357 CEAPEVCTCPE 389
           CE PEVC  P+
Sbjct: 222 CEKPEVCDYPD 232


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 357 CEAPEVCTCPE 389
           CE PEVC  P+
Sbjct: 222 CEKPEVCDYPD 232


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 357 CEAPEVCTCPE 389
           CE PEVC  P+
Sbjct: 222 CEKPEVCDYPD 232


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,204
Number of Sequences: 438
Number of extensions: 5401
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)