Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_P14
(809 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical pr... 29 3.9
U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z46787-10|CAA86749.1| 154|Caenorhabditis elegans Hypothetical p... 29 5.2
U49947-6|AAA93424.1| 85|Caenorhabditis elegans Hypothetical pr... 29 5.2
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 28 6.9
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 28 9.1
U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily ass... 28 9.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 9.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 9.1
DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein. 28 9.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 9.1
>Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical
protein R08D7.1 protein.
Length = 458
Score = 30.3 bits (65), Expect = 1.7
Identities = 30/107 (28%), Positives = 44/107 (41%)
Frame = +1
Query: 268 TARPYGATPRPARTSPRCDVRSARSWSGRSEDTAPSPSRRRACSPGRHPGNLEAEALAAD 447
+AR + PR R D R+ S R D SP RRR SP R + +
Sbjct: 173 SARNRRSPPRTRRDRHDSDNSPPRNRSRRDSDN--SPPRRRPSSPARRRKDDDLSPPRKS 230
Query: 448 YRWRXDLRSRGEGRPSEGVVRARRLHSRRSVLEAWSRRLADPSAGLR 588
+ + + E S+ R L +RS L++ +R L + S LR
Sbjct: 231 RKIEEPKKIKKEEPDSDTETSGRTLEGKRSGLQS-ARDLKEESDKLR 276
>Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical
protein C27B7.7 protein.
Length = 1471
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 472 SRGEGRPSEGVVRARRLHSRRSVLEAWSRRLADPSAGL 585
+RG+ RPS V + R ++ + ++ WSR A SAG+
Sbjct: 469 ARGKPRPSISVAISDRKNASQVEVDVWSRLQATSSAGI 506
>U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical
protein T27A3.4 protein.
Length = 203
Score = 29.1 bits (62), Expect = 3.9
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 280 YGATPRPARTSPRCDVRSA-RSWSG-RSEDTAPSPSRRRACSPGRHPGNLEAEALAADYR 453
YG T R +R+S R RS R+ SG RS + S SRR + RH + +A A
Sbjct: 120 YGRTGR-SRSSKRSRSRSRPRTRSGSRSSSRSRSGSRRSSRRRSRHRSSSKARGRRASTA 178
Query: 454 WRXDLRSRGEGRPSEGVVRA 513
+ + R R + V R+
Sbjct: 179 KKTPAKRRSRSRSQQKVKRS 198
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -3
Query: 618 RENRADRLDGSEAGRRVRQAARPRLQHGPPRVKPPRSNYTFAGAPFPPRAEVXTP 454
R+ A+ +EA R R+ R R P PPR+N P PP + P
Sbjct: 63 RQQSAEERARAEADARRRERCRNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQP 117
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -3
Query: 618 RENRADRLDGSEAGRRVRQAARPRLQHGPPRVKPPRSNYTFAGAPFPPRAEVXTP 454
R+ A+ +EA R R+ R R P PPR+N P PP + P
Sbjct: 63 RQQSAEERARAEADARRRERCRNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQP 117
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -3
Query: 618 RENRADRLDGSEAGRRVRQAARPRLQHGPPRVKPPRSNYTFAGAPFPPRAEVXTP 454
R+ A+ +EA R R+ R R P PPR+N P PP + P
Sbjct: 63 RQQSAEERARAEADARRRERCRNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQP 117
>Z46787-10|CAA86749.1| 154|Caenorhabditis elegans Hypothetical
protein C16C10.11 protein.
Length = 154
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 295 RPARTSPRCDVRSARSWSGRSEDTAPSPSRRRACSPGRHP 414
R A SP VRSA + +S AP P R A +P HP
Sbjct: 5 RTASPSPSAPVRSAPRPAAQSSFAAP-PPRPAAAAPAYHP 43
>U49947-6|AAA93424.1| 85|Caenorhabditis elegans Hypothetical
protein C30G4.5 protein.
Length = 85
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 149 LRKVSAEVPPTIQFKAEVPKTGHPDPD 69
LRKV+ + PPTI + E PK + PD
Sbjct: 9 LRKVNEQQPPTIIEEDETPKRANRPPD 35
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -3
Query: 591 GSEAGRRVRQAARPRLQHGPPRVKPPRSNYTFAGAPFPPRAEVXTPP 451
G+ G RQA + H PP V PP+ A P P + V PP
Sbjct: 259 GARHGSISRQATLTFVSHKPPPVNPPQP----AVPPKPAKISVADPP 301
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 286 ATPRPARTSPRCDVRSARSWSGRSEDTAPSPSRRRACSP 402
A P PA+ +P+ + A S S S+D AP+ +P
Sbjct: 264 AKPAPAKATPKPAAKKADSSSDSSDDEAPAKKTPAKAAP 302
>U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 326 protein.
Length = 560
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 657 RKVRHSAVAAHPVRENRADRLDGSEAGRRVRQAARPRLQHGPPRVKPPR 511
R RH + + PVR R+ D + G R +Q + R + P V PR
Sbjct: 443 RNGRHDSRSVSPVRRRRSPSPDNRQLGSR-KQYSPLRRRQSSPMVASPR 490
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = -3
Query: 552 PRLQHGPPRVKPPRSNYTFAGAPFPPRAEVXTPPVIG 442
P + GPP PP G P PP PP+ G
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG 756
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = -3
Query: 552 PRLQHGPPRVKPPRSNYTFAGAPFPPRAEVXTPPVIG 442
P + GPP PP G P PP PP+ G
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG 756
>DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein.
Length = 560
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 657 RKVRHSAVAAHPVRENRADRLDGSEAGRRVRQAARPRLQHGPPRVKPPR 511
R RH + + PVR R+ D + G R +Q + R + P V PR
Sbjct: 443 RNGRHDSRSVSPVRRRRSPSPDNRQLGSR-KQYSPLRRRQSSPMVASPR 490
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = -3
Query: 552 PRLQHGPPRVKPPRSNYTFAGAPFPPRAEVXTPPVIG 442
P + GPP PP G P PP PP+ G
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG 339
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,302,240
Number of Sequences: 27780
Number of extensions: 310355
Number of successful extensions: 1048
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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