Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_P14
         (809 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.83 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.83 
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        25   1.1  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   5.8  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.0 bits (52), Expect = 0.83
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +1

Query: 277  PYGATPRPARTSPRCDVRS-ARSWSGRSEDTAPSPSRRRACSPGRHPGNLEAEALAA 444
            PY A     + + R  +R  A   +GRS  +A    R     P   P NLEA AL++
Sbjct: 964  PYAALIDELKPATRYTIRVIAEGPAGRSVPSAELIVRTEPQRPAGPPINLEARALSS 1020


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.0 bits (52), Expect = 0.83
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +1

Query: 277  PYGATPRPARTSPRCDVRS-ARSWSGRSEDTAPSPSRRRACSPGRHPGNLEAEALAA 444
            PY A     + + R  +R  A   +GRS  +A    R     P   P NLEA AL++
Sbjct: 960  PYAALIDELKPATRYTIRVIAEGPAGRSVPSAELIVRTEPQRPAGPPINLEARALSS 1016


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
 Frame = +1

Query: 226 RAASTWGWCGRWHYTARPYGATPRPARTSPRCDVRSAR-----SWSGRSEDT-APSPSRR 387
           +AA        W Y A PY     P + S +C+  + +     SW   SED   PS   R
Sbjct: 202 KAAKRMRPAANWGYYAYPYCYNLTPNQPSAQCEATTMQENDKMSWLFESEDVLLPSVYLR 261

Query: 388 RACSPGRHPG 417
              + G   G
Sbjct: 262 WNLTSGERVG 271


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +1

Query: 355 SEDTAPSPSRRRACSPGRHPGN 420
           S+   P P  RR   P   PGN
Sbjct: 106 SQPRPPHPRLRREAEPEAEPGN 127



 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +1

Query: 355 SEDTAPSPSRRRACSPGRHPGN 420
           S+   P P  RR   P   PGN
Sbjct: 162 SQPRPPHPRLRREAEPEAEPGN 183


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,536
Number of Sequences: 438
Number of extensions: 4165
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)