Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_P13
(794 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 49 5e-06
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 42 7e-04
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 33 0.35
02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659... 31 0.80
04_04_0706 + 27419215-27419371,27419521-27419734,27419818-274199... 30 2.4
03_01_0347 - 2730242-2730425,2730541-2730692,2730782-2730940,273... 29 3.2
12_02_1217 + 27082452-27083593,27085041-27085158 29 4.3
02_04_0331 - 22087692-22087946,22088060-22088179,22088338-220884... 29 4.3
12_02_0406 - 18648414-18648809,18650049-18650180,18650959-186510... 29 5.6
10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010 29 5.6
10_06_0145 + 11215895-11216860 28 7.4
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 28 7.4
04_03_0573 + 17329365-17330440,17330505-17331201 28 7.4
03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484 28 7.4
02_02_0298 - 8713660-8714073 28 7.4
06_01_0931 + 7192519-7194075 28 9.8
06_01_0290 + 2122758-2123015,2123128-2123544 28 9.8
01_06_0854 - 32477994-32478161,32478689-32478826,32479225-324794... 28 9.8
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 28 9.8
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 48.8 bits (111), Expect = 5e-06
Identities = 48/156 (30%), Positives = 68/156 (43%)
Frame = +1
Query: 94 ADVIGIHKPGKPKNETASYRPISLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRAR 273
A ++ I KPGK +N YRPISL K+ ++L RL V I +D Q GF +
Sbjct: 971 AYIVLIQKPGK-ENTVDGYRPISLQNCSVKILSKVLATRL-QRVFLRMIHLD-QTGF-LK 1026
Query: 274 HSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 453
C+ + ++ RRK T + D KAFD V + L L G P+ +
Sbjct: 1027 GRCISENLIYATELIQACYRRK-CQTIIVKLDFTKAFDSVIWSSLFKILAVRGFPENWIS 1085
Query: 454 IIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALS 561
I+ LS+ + G R G+ QG LS
Sbjct: 1086 WIKGLLSSSKSAVLLNGVPGRWICCKKGLLQGDPLS 1121
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 41.5 bits (93), Expect = 7e-04
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 1/149 (0%)
Frame = +1
Query: 118 PGKPKNETAS-YRPISLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQV 294
P K ET + +RPISL+ K+ +LL RL + K++ D +GF +
Sbjct: 377 PKKTSLETVNDFRPISLMGISLKIVTKLLAGRLQGVIL--KLVSDNHYGFIKGKTIQDCP 434
Query: 295 HRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLS 474
E+I ++ I L D KAFD + H+ ++ + +MG P + + ++ S
Sbjct: 435 AWPFEYIHQCQQSKREIVL--LKLDFEKAFDTIEHSAILSVMQHMGFPLKWIEWVQMVFS 492
Query: 475 NRSFRYRVEGTRSRPRHVTAGVPQGSALS 561
S + G GV QG LS
Sbjct: 493 TASSAVLLNGVPGNSFKCRRGVRQGVPLS 521
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 32.7 bits (71), Expect = 0.35
Identities = 28/105 (26%), Positives = 42/105 (40%)
Frame = +1
Query: 250 EQFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNM 429
+Q GF + C+ + ++ + RK T + D AKAFD V L L
Sbjct: 5 DQTGF-LKGRCISENLIYATELIQACHARK-CQTLIIKLDFAKAFDSVNWQSLFQILSVK 62
Query: 430 GVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 564
G PD + I++ L + G + G+ QG LSP
Sbjct: 63 GFPDNWISWIKNLLQTSKSAVLLHGIPGKWITCKKGLRQGDPLSP 107
>02_02_0078 +
6587491-6588021,6588160-6589151,6592430-6592607,
6592635-6592794,6592992-6593158,6593246-6593869
Length = 883
Score = 31.5 bits (68), Expect = 0.80
Identities = 31/141 (21%), Positives = 59/141 (41%)
Frame = +1
Query: 142 ASYRPISLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILL 321
+ +RPISL + K+ ++L RL F+ I+ + Q F E +
Sbjct: 185 SKFRPISLCNVLYKIASKVLANRLKLFLP--DIVSEFQSAFVPGRLITDSSLVAYECLNT 242
Query: 322 GLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE 501
+ P AL D+ KA+D++ + L L +G + + +++ + R+
Sbjct: 243 IKKQSNKKPFFALKIDMMKAYDRIEWSYLHGCLMRLGFEQDWINTVMRCVTSTRYAIRIN 302
Query: 502 GTRSRPRHVTAGVPQGSALSP 564
G + + G+ QG +SP
Sbjct: 303 GELTDTVVPSRGIRQGDPISP 323
>04_04_0706 +
27419215-27419371,27419521-27419734,27419818-27419913,
27420006-27420123,27420211-27420384,27420633-27420803,
27420932-27420987,27421125-27421214,27421296-27421444,
27421640-27421722,27421830-27421958,27422063-27422137,
27422248-27422416,27422965-27423104,27423191-27423298,
27423603-27423783,27424445-27424542,27424639-27424728,
27424881-27425034,27425376-27425431,27425483-27425533,
27425651-27425732,27425821-27425995,27426748-27426823,
27426951-27427121,27427198-27427269,27427350-27427454,
27427948-27428037,27428703-27428908,27428989-27429190,
27429294-27429473,27429858-27429925,27430005-27430341,
27430428-27430637,27430765-27431448,27431537-27431940,
27432495-27432542,27432777-27433023,27433381-27433602,
27433796-27434026
Length = 2122
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 477 VRQVVSYDEHESVWHSHVIQFVYQTVVPDFVERLRY 370
V +V Y + HSH+I+ V + FVER+ Y
Sbjct: 352 VESLVGYSSSDDSCHSHLIEIVETLNIEKFVERIVY 387
>03_01_0347 -
2730242-2730425,2730541-2730692,2730782-2730940,
2734144-2734618,2734713-2734775,2734870-2735078
Length = 413
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 618 WALFADDTAIYYSCRKKXLLHRRXQTXATTMGTVVPGSGASTLTLTKSTAV 770
W A D + R + + R + A GTVV +G +T+TL K TA+
Sbjct: 155 WLTLARDQINLDAVRMEIVDVRSIRGLAKVAGTVVSFAGVTTMTLYKGTAI 205
>12_02_1217 + 27082452-27083593,27085041-27085158
Length = 419
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +2
Query: 410 YTNCITWECQTDSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSP 562
Y ++ C T +CS E V SD + + G + + R PP P
Sbjct: 27 YVLALSSSCNTPACSDEEEEDDEVGSDADGDDLYGGELEEEDSPRPPPPRP 77
>02_04_0331 -
22087692-22087946,22088060-22088179,22088338-22088439,
22088523-22088582,22088657-22088709,22088790-22088875,
22089060-22089104,22089484-22089565,22089670-22089784
Length = 305
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 253 ARL*EFYSRIRSPRGVYEGAVRIVCLSPGG 164
ARL EF +R S G G RIVC++ GG
Sbjct: 26 ARLGEFIARNSSAAGAGGGGRRIVCVTSGG 55
>12_02_0406 -
18648414-18648809,18650049-18650180,18650959-18651065,
18652979-18653183
Length = 279
Score = 28.7 bits (61), Expect = 5.6
Identities = 31/134 (23%), Positives = 51/134 (38%)
Frame = +1
Query: 211 LWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDK 390
+W + + ++ R R + H++HRL + L L T A +AF
Sbjct: 2 VWPYFCHGEHVLTTDVRMRRRSAHAHRLHRLRDGSRLALANLGTADTAAAPMYDVQAFPY 61
Query: 391 VWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXT 570
V G L + P+ V +R Y+ V G RP T G S+ +
Sbjct: 62 V---GTTEPLGEIVRPETQVTSLRVYMVFGVTWVNVTGEIVRPEAQTRGPGNKSSGHMSS 118
Query: 571 IQFVYQRYTPVSGD 612
QF + + V+G+
Sbjct: 119 EQFSWVTWVNVTGE 132
>10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010
Length = 520
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/57 (24%), Positives = 32/57 (56%)
Frame = -3
Query: 543 RDSGCDVTGPGTRSLDSISERTVRQVVSYDEHESVWHSHVIQFVYQTVVPDFVERLR 373
+ SGC++ G TR + +++ + + +EHE+ +S ++ ++ + D +RLR
Sbjct: 78 KHSGCEIVGEETRKVCNVTMEHLEKSSLSEEHEAPSYSQALRCTPESSL-DSTKRLR 133
>10_06_0145 + 11215895-11216860
Length = 321
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +2
Query: 446 SCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPR 565
S S TT +D+ S P P +S + PP+PR
Sbjct: 240 SVSEASTTTTADAADVSSTGSSPSPTSSNQAATATPPAPR 279
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 502 GTRSRPRHVTAGVPQGSALSP 564
G RSRPR AG PQ +A SP
Sbjct: 156 GRRSRPRRCLAGRPQATAGSP 176
>04_03_0573 + 17329365-17330440,17330505-17331201
Length = 590
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 79 AAWKEADVIGIHKPGKPKNETASYRPISLLPAI-GKLYERLLRKR 210
A ++E D + + PG +++ ++RP LP + +L E L +R
Sbjct: 281 AVYREDDRVDVATPGDGRSDYPAFRPTPTLPLVASRLAEEWLEER 325
>03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484
Length = 663
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 367 DIAKAFDKVWHNGLIYKLYNMG-VPDRLVL 453
D+A+AF+ V H G + +YN+G V +R V+
Sbjct: 230 DVAEAFEVVLHKGEVGHVYNIGTVKERRVI 259
>02_02_0298 - 8713660-8714073
Length = 137
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 367 RRRGLLSEWVSACSALVRCAP*GGALDGRTSVWR 266
R RGLL+ +A A CA G DG WR
Sbjct: 85 RNRGLLTTAAAAGDACAACAAGAGGGDGADGCWR 118
>06_01_0931 + 7192519-7194075
Length = 518
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 538 VPQGSALSPXTIQFVYQRYTPVSGDPSGRS-SPMTPPSTTRVGRRXCFID 684
+P + LSP T + V +R P P RS +P PP + V R + D
Sbjct: 110 LPYPAPLSPDTARDVVRRLMPSPPPPPPRSQAPPPPPPASSVRTRSYYSD 159
>06_01_0290 + 2122758-2123015,2123128-2123544
Length = 224
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 579 KLNSXRGEGGALRDSGCDVTGPGTR 505
K S G G + D+GCDV G G R
Sbjct: 37 KRGSGSGSGDEVDDAGCDVGGGGAR 61
>01_06_0854 -
32477994-32478161,32478689-32478826,32479225-32479440,
32479580-32479656,32481144-32481555,32482248-32482850,
32482954-32483229
Length = 629
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 77 PRRGKKRTLSAYTSRANRRTKPRVTAP 157
PR G+KR + R +PRVTAP
Sbjct: 402 PRSGRKRGAGQQRRQRRRSPRPRVTAP 428
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 258 WIPRQTLVRPSSAPPHGAHLTRAEQ-AETHSDRSP 359
W P L P++A P G LT E A T +D SP
Sbjct: 596 WCPMARLFGPTAAAPFGHDLTVPEALANTRADGSP 630
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,958,251
Number of Sequences: 37544
Number of extensions: 613277
Number of successful extensions: 2217
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2215
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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