Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_P12
         (817 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016684-15|AAB66214.1|  543|Caenorhabditis elegans Hypothetical...    29   4.0  
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr...    28   9.2  

>AF016684-15|AAB66214.1|  543|Caenorhabditis elegans Hypothetical
           protein F45C12.15 protein.
          Length = 543

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = +3

Query: 495 VTWRKRSSPFKTPA*SGSRTLPGGEFDWGGTSVKE*RRCPKXSSARTETSRGAKGQKPGX 674
           +T RKR++  +TP  S S +    +  +    V+  RR  K +++R  TS   + +K   
Sbjct: 27  LTTRKRTAQQQTPVDSSSSSSDASDESFVACPVEAKRRKKKLTNSRKSTSELPEKKKTDK 86

Query: 675 LNXQK 689
           +N Q+
Sbjct: 87  VNLQR 91


>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical protein
            F26C11.3 protein.
          Length = 1317

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 11/96 (11%)
 Frame = +3

Query: 411  TSTYSQTLNG*ELRLTRTNGVS-FQACRVVTWRKRSSPFKTPA*SGSRTLPGGEFDWGGT 587
            T+   Q +       TRT   S  Q C+  +  +  + F  P    +RTLP GE     +
Sbjct: 1039 TTVLMQLIYNPSTNKTRTETTSDAQGCKATSTTQTPTTFNWPTGGTTRTLPSGEIILSES 1098

Query: 588  SVKE*RRC----------PKXSSARTETSRGAKGQK 665
             +   + C          P  ++ RTET+  A+G K
Sbjct: 1099 LIAY-KNCTTVLMQLIYNPSKNTTRTETTSDAEGCK 1133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,286,569
Number of Sequences: 27780
Number of extensions: 353535
Number of successful extensions: 778
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)