Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_P03
(802 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 0.96
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 25 1.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 25 1.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 25 2.0
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.2
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 399 PPPLFFFXXXXKKKXGGGXXXKXXGXPPPPPP 494
PPP FF ++ GG + G PPPPPP
Sbjct: 498 PPPQFFNSQHLPQRFRGG---RQRGAPPPPPP 526
>Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 31.1 bits (67), Expect = 0.96
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 399 PPPLFFFXXXXKKKXGGGXXXKXXGXPPPPPP 494
PPP FF ++ GG + G PPPPPP
Sbjct: 498 PPPQFFNSQHLPQRFRGG---RQRGAPPPPPP 526
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +3
Query: 393 PPPPPLFFFXXXXKKKXGGGXXXKXX--GXPPPPPP 494
PPPPP+F GG G PPPPPP
Sbjct: 84 PPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 25.0 bits (52), Expect(2) = 1.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 706 PPPPPXPPXXG 674
PPPPP PP G
Sbjct: 769 PPPPPPPPPGG 779
Score = 23.4 bits (48), Expect(2) = 1.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 709 PPPPPPXP 686
PPPPPP P
Sbjct: 758 PPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 25.0 bits (52), Expect(2) = 1.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 706 PPPPPXPPXXG 674
PPPPP PP G
Sbjct: 769 PPPPPPPPPGG 779
Score = 23.4 bits (48), Expect(2) = 1.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 709 PPPPPPXP 686
PPPPPP P
Sbjct: 758 PPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 25.0 bits (52), Expect(2) = 2.0
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 706 PPPPPXPPXXG 674
PPPPP PP G
Sbjct: 352 PPPPPPPPPGG 362
Score = 23.4 bits (48), Expect(2) = 2.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 709 PPPPPPXP 686
PPPPPP P
Sbjct: 341 PPPPPPPP 348
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 709 PPPPPPXPPXXGXG 668
PPPPPP PP G G
Sbjct: 52 PPPPPPPPPMCGCG 65
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 393 PPPPPLFFFXXXXKKKXGGGXXXKXXGXPPPPPP 494
PPPPP GG G PPPPPP
Sbjct: 272 PPPPPT---GSPPPPPAGGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 393 PPPPPLFFFXXXXKKKXGGGXXXKXXGXPPPPPP 494
PPPPP GG G PPPPPP
Sbjct: 293 PPPPPT---GSPPPPPAGGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 393 PPPPPLFFFXXXXKKKXGGGXXXKXXGXPPPPPP 494
PPPPP GG G PPPPPP
Sbjct: 278 PPPPPT---GSPPPPPAGGSPPPPRAGSPPPPPP 308
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +3
Query: 393 PPPPPLFFFXXXXKKKXGGGXXXKXXGXPPPPPP 494
PPPPPL K G G PPPPPP
Sbjct: 552 PPPPPL---PLDLLKGAVAGLKSVPGGPPPPPPP 582
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 709 PPPPPPXPPXXG 674
PPPPPP PP G
Sbjct: 576 PPPPPPPPPMLG 587
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,901,368
Number of Sequences: 27780
Number of extensions: 267621
Number of successful extensions: 5800
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3051
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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