Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_P03
         (802 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   0.82 
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    25   1.1  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    25   1.1  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    25   1.1  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    25   1.1  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    25   1.1  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    25   1.1  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    25   1.1  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    25   1.1  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    25   1.1  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    25   1.1  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    25   1.1  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    25   1.1  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    25   1.1  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    25   1.1  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    25   1.1  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          25   1.1  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          25   1.1  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          25   1.1  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          25   1.1  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          25   1.1  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          25   1.1  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          25   1.1  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    25   1.1  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    25   1.1  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 705  PPPPPXPPXXG 673
            PPPPP PP  G
Sbjct: 1355 PPPPPPPPSSG 1365


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFP 121
           W P   Q P F+  GP+  FP
Sbjct: 140 WVPMQEQIPRFRHIGPSTPFP 160


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFP 121
           W P   Q P F+  GP+  FP
Sbjct: 140 WVPMQEQIPRFRHIGPSTPFP 160


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFP 121
           W P   Q P F+  GP+  FP
Sbjct: 140 WVPMQEQIPRFRHIGPSTPFP 160


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFP 121
           W P   Q P F+  GP+  FP
Sbjct: 140 WVPMQEQIPRFRHIGPSTPFP 160


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFP 121
           W P   Q P F+  GP+  FP
Sbjct: 140 WVPMQEQIPRFRHIGPSTPFP 160


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFP 121
           W P   Q P F+  GP+  FP
Sbjct: 140 WVPMQEQIPRFRHIGPSTPFP 160


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFP 121
           W P   Q P F+  GP+  FP
Sbjct: 140 WVPMQEQIPRFRHIGPSTPFP 160


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFP 121
           W P   Q P F+  GP+  FP
Sbjct: 143 WVPMQEQIPRFRHIGPSTPFP 163


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFPXPF 130
           W P   Q PG +  GP   FP  F
Sbjct: 109 WVPMRGQVPGSRHIGPLTPFPPRF 132


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFPXPF 130
           W P   Q PG +  GP   FP  F
Sbjct: 109 WVPMRGQVPGSRHIGPLTPFPPRF 132


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFPXPF 130
           W P   Q PG +  GP   FP  F
Sbjct: 109 WVPMRGQVPGSRHIGPLTPFPPRF 132


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFPXPF 130
           W P   Q PG +  GP   FP  F
Sbjct: 109 WVPMRGQVPGSRHIGPLTPFPPRF 132


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFPXPF 130
           W P   Q PG +  GP   FP  F
Sbjct: 109 WVPMRGQVPGSRHIGPLTPFPPRF 132


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFPXPF 130
           W P   Q PG +  GP   FP  F
Sbjct: 109 WVPMRGQVPGSRHIGPLTPFPPRF 132


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFPXPF 130
           W P   Q PG +  GP   FP  F
Sbjct: 109 WVPMRGQVPGSRHIGPLTPFPPRF 132


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFPXPF 130
           W P   Q PG +  GP   FP  F
Sbjct: 358 WVPMRGQVPGSRHIGPLTPFPPRF 381


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFPXPF 130
           W P   Q PG +  GP   FP  F
Sbjct: 358 WVPMRGQVPGSRHIGPLTPFPPRF 381


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFPXPF 130
           W P   Q PG +  GP   FP  F
Sbjct: 358 WVPMRGQVPGSRHIGPLTPFPPRF 381


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFPXPF 130
           W P   Q PG +  GP   FP  F
Sbjct: 358 WVPMRGQVPGSRHIGPLTPFPPRF 381


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFPXPF 130
           W P   Q PG +  GP   FP  F
Sbjct: 358 WVPMRGQVPGSRHIGPLTPFPPRF 381


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFPXPF 130
           W P   Q PG +  GP   FP  F
Sbjct: 358 WVPMRGQVPGSRHIGPLTPFPPRF 381


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFPXPF 130
           W P   Q PG +  GP   FP  F
Sbjct: 357 WVPMRGQVPGSRHIGPLTPFPPRF 380


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFPXPF 130
           W P   Q PG +  GP   FP  F
Sbjct: 342 WVPMRGQVPGSRHIGPLTPFPPRF 365


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 59  WGPXPPQKPGFKEXGPTXXFPXPF 130
           W P   Q PG +  GP   FP  F
Sbjct: 358 WVPMRGQVPGSRHIGPLTPFPPRF 381


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,743
Number of Sequences: 438
Number of extensions: 5077
Number of successful extensions: 75
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)