Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_P01
(858 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 43 4e-06
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 41 1e-05
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 40 4e-05
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 40 4e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 39 5e-05
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 39 7e-05
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 37 3e-04
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 37 3e-04
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 37 3e-04
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 37 3e-04
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 37 3e-04
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 37 3e-04
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 36 5e-04
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 36 5e-04
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 35 0.001
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 35 0.001
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 34 0.002
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 31 0.014
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 31 0.018
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 29 0.072
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 27 0.17
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 24 2.1
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 24 2.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 8.3
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 8.3
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 8.3
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 8.3
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.3
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 42.7 bits (96), Expect = 4e-06
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Frame = +1
Query: 97 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 255
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 256 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPD 372
+ L+ W D + W+ E+G T L V SE +W PD
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPD 106
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 41.5 bits (93), Expect = 1e-05
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Frame = +1
Query: 115 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 279
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 280 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 372
+ W L+W + E+ ++ V S +W PD
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPD 119
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 41.1 bits (92), Expect = 1e-05
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +1
Query: 121 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 288
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 289 IDKRLSWNAGEWGCSTWLVSSERLWRPD 372
+D+RL++ G+ + + R+W+PD
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPD 89
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 39.5 bits (88), Expect = 4e-05
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Frame = +1
Query: 142 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 306
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 307 WNAGEW-GCSTWLVSSERLWRPD-XXXXXXXXXXXGDYALRARVSNNGSXSWI 459
WN E+ G ++ +LW+PD G Y V++NGS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 39.5 bits (88), Expect = 4e-05
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Frame = +1
Query: 142 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 306
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 307 WNAGEW-GCSTWLVSSERLWRPD-XXXXXXXXXXXGDYALRARVSNNGSXSWI 459
WN E+ G ++ +LW+PD G Y V++NGS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 39.1 bits (87), Expect = 5e-05
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Frame = +1
Query: 85 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 243
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 244 SESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 372
T + ++ W D +L WN ++ G T V SE +W PD
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPD 106
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 38.7 bits (86), Expect = 7e-05
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD-XXXXXXXXXXX 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGSXSWI 459
G Y V++NGS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 36.7 bits (81), Expect = 3e-04
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD-XXXXXXXXXXX 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGSXSWI 459
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 36.7 bits (81), Expect = 3e-04
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD-XXXXXXXXXXX 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGSXSWI 459
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 36.7 bits (81), Expect = 3e-04
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD-XXXXXXXXXXX 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGSXSWI 459
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 36.7 bits (81), Expect = 3e-04
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD-XXXXXXXXXXX 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGSXSWI 459
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 36.7 bits (81), Expect = 3e-04
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD-XXXXXXXXXXX 405
++ E + A L++ W+D L WN E+ G ++ +LW+PD
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 406 GDYALRARVSNNGSXSWI 459
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 36.7 bits (81), Expect = 3e-04
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Frame = +1
Query: 115 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 273
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 274 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPD 372
++ +W D +L W+ E+G L V S+ +WRPD
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPD 110
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 35.9 bits (79), Expect = 5e-04
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 7/129 (5%)
Frame = +1
Query: 94 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 258
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 259 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPD-XXXXXXXXXXXGDYALRARV 432
L++ W D + WN ++G L + RLW+PD G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 433 SNNGSXSWI 459
NNG+ ++
Sbjct: 131 KNNGTCLYV 139
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 35.9 bits (79), Expect = 5e-04
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Frame = +1
Query: 142 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 306
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 307 WNAGEWGCSTWL-VSSERLWRPD 372
WN E+G L V SE +W PD
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPD 119
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 34.7 bits (76), Expect = 0.001
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Frame = +1
Query: 142 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 306
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 307 WNAGEWGCSTWL-VSSERLWRPD 372
W E+G L V S+ +WRPD
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPD 114
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 34.7 bits (76), Expect = 0.001
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Frame = +1
Query: 142 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 306
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 307 WNAGEWGCSTWL-VSSERLWRPD 372
W E+G L V S+ +WRPD
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPD 114
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 33.9 bits (74), Expect = 0.002
Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
Frame = +1
Query: 196 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 372
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 373 XXXXXXXXXXXGDYALRAR--VSNNGSXSWI 459
+ VS+ G W+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 31.1 bits (67), Expect = 0.014
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = +1
Query: 193 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 366
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 367 PDXXXXXXXXXXXGDYALRAR----VSNNGSXSWI 459
PD G+Y +R + + NG W+
Sbjct: 111 PD---IVLFNNADGNYEVRYKSNVLIYPNGDVLWV 142
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 30.7 bits (66), Expect = 0.018
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +1
Query: 130 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 294
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 295 KRLSWNAGEWGCSTWLVSSERLWRPD 372
RLS+ S + ER+WRPD
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPD 121
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 28.7 bits (61), Expect = 0.072
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Frame = +1
Query: 121 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 288
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 289 IDKRLSWNAGEWGCSTWLVSSE---RLWRPD 372
D RL++ G T V SE +W PD
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPD 97
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 27.5 bits (58), Expect = 0.17
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Frame = +1
Query: 121 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 288
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 289 IDKRLSWNAGEWGCSTWLVSSE---RLWRPD 372
D RL++ G T V SE +W PD
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPD 97
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 23.8 bits (49), Expect = 2.1
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 28 LLXYWIKCRRLILFWLPFLLTCAIAS 105
LL YW+ R W+ F + C+ AS
Sbjct: 87 LLGYWVFGPRFCDTWIAFDVMCSTAS 112
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.8 bits (49), Expect = 2.1
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 18 SSTTVXLLDKMSTTYIILVTVSPHL 92
SST V L S T ILV VS H+
Sbjct: 554 SSTLVSFLQPFSNTLWILVMVSVHV 578
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 92 QVRRNGNQNNISRRHFI 42
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 92 QVRRNGNQNNISRRHFI 42
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 92 QVRRNGNQNNISRRHFI 42
++ RNG N + RRH I
Sbjct: 218 RIYRNGTVNYLMRRHLI 234
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 92 QVRRNGNQNNISRRHFI 42
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 339 PSAAAPFPCVPTQS 298
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,790
Number of Sequences: 438
Number of extensions: 3709
Number of successful extensions: 40
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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