Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_O10
         (840 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ005958-1|AAY27747.1|  620|Homo sapiens membralin protein protein.    30   9.1  
BC008957-1|AAH08957.1|  408|Homo sapiens chromosome 19 open read...    30   9.1  
AC004528-3|AAC12681.1|  529|Homo sapiens R32184_3 protein.             30   9.1  

>DQ005958-1|AAY27747.1|  620|Homo sapiens membralin protein protein.
          Length = 620

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 554 LRVSEARKQTISMSISARLIRPTRDWCSCDR 462
           LR+S+A +Q +S+ +    + PTRD C  DR
Sbjct: 220 LRLSQATRQRLSIPVMVVTLDPTRDQCFGDR 250


>BC008957-1|AAH08957.1|  408|Homo sapiens chromosome 19 open reading
           frame 6 protein.
          Length = 408

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 554 LRVSEARKQTISMSISARLIRPTRDWCSCDR 462
           LR+S+A +Q +S+ +    + PTRD C  DR
Sbjct: 220 LRLSQATRQRLSIPVMVVTLDPTRDQCFGDR 250


>AC004528-3|AAC12681.1|  529|Homo sapiens R32184_3 protein.
          Length = 529

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 554 LRVSEARKQTISMSISARLIRPTRDWCSCDR 462
           LR+S+A +Q +S+ +    + PTRD C  DR
Sbjct: 220 LRLSQATRQRLSIPVMVVTLDPTRDQCFGDR 250


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,738,783
Number of Sequences: 237096
Number of extensions: 2564751
Number of successful extensions: 18154
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18143
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)