Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_N23
(848 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor de... 33 1.7
BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor, n... 33 1.7
BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor, n... 33 1.7
AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein. 33 1.7
U79266-1|AAB50210.1| 285|Homo sapiens unknown protein. 31 7.0
BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein. 31 7.0
Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for ... 30 9.2
X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor pr... 30 9.2
S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine r... 30 9.2
M59216-1|AAA35862.1| 474|Homo sapiens gamma-aminobutyric acid r... 30 9.2
BC022449-1|AAH22449.1| 474|Homo sapiens gamma-aminobutyric acid... 30 9.2
BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein. 30 9.2
AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein. 30 9.2
>X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor delta
subunit protein.
Length = 517
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +1
Query: 142 YDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG 303
Y++E P + + V L L L + +++E E T+ ++ W D RL WNA E+G
Sbjct: 38 YNKELRPVAHKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +1
Query: 142 YDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG 303
Y++E P + + V L L L + +++E E T+ ++ W D RL WNA E+G
Sbjct: 38 YNKELRPVAHKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +1
Query: 142 YDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG 303
Y++E P + + V L L L + +++E E T+ ++ W D RL WNA E+G
Sbjct: 38 YNKELRPVAHKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein.
Length = 517
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +1
Query: 142 YDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG 303
Y++E P + + V L L L + +++E E T+ ++ W D RL WNA E+G
Sbjct: 38 YNKELRPVAHKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>U79266-1|AAB50210.1| 285|Homo sapiens unknown protein.
Length = 285
Score = 30.7 bits (66), Expect = 7.0
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = -1
Query: 404 PGERS-PPXGGCXRV*QYHVRPPQAFPRTPXQVLQPHSPAFQLSRLSIQFI*RSASIRTV 228
PG R PP R + + RP PR P L+P S R + SA I
Sbjct: 82 PGCRQDPPRADPQRAVKEYSRPAAGKPRPPPSQLRPPSVLLATVRYLAGEVAESADIARA 141
Query: 227 DSDSRMLACLKCRVRLTTILESGGDSRSYV 138
+ S + L+ VRL L+ GD+ + V
Sbjct: 142 EVASFVADRLRA-VRLDLALQGAGDAEAAV 170
>BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein.
Length = 465
Score = 30.7 bits (66), Expect = 7.0
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +1
Query: 58 LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKI--VVNLTLHLRHANI---RES 222
LL A+ A+ N L+ D L+ YD P + VVN++L L N+ E
Sbjct: 11 LLLLAVCLGAQGRNQEE-RLLAD-LMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNER 68
Query: 223 ESTVRILADLQMNWIDKRLSWNAGEW 300
E + ++M W D RL W+ ++
Sbjct: 69 EEALTTNVWIEMQWCDYRLRWDPRDY 94
>Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor alpha-subunit. ).
Length = 457
Score = 30.3 bits (65), Expect = 9.2
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Frame = +1
Query: 49 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NI 213
+ LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 214 RESESTVRILADLQMNWIDKRLSWNAGEWG 303
E V L+ W+D L WN ++G
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor
protein.
Length = 457
Score = 30.3 bits (65), Expect = 9.2
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Frame = +1
Query: 49 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NI 213
+ LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 214 RESESTVRILADLQMNWIDKRLSWNAGEWG 303
E V L+ W+D L WN ++G
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine
receptor alpha subunit|AChR protein.
Length = 457
Score = 30.3 bits (65), Expect = 9.2
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Frame = +1
Query: 49 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NI 213
+ LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 214 RESESTVRILADLQMNWIDKRLSWNAGEWG 303
E V L+ W+D L WN ++G
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>M59216-1|AAA35862.1| 474|Homo sapiens gamma-aminobutyric acid
receptor beta-1 subunit protein.
Length = 474
Score = 30.3 bits (65), Expect = 9.2
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Frame = +1
Query: 34 LILFCYXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRH 204
L+ F + C S E N + + +D LL YD PD + V + + +
Sbjct: 12 LLSFPVMITMVCCAHSTNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVAS 71
Query: 205 AN-IRESESTVRILADLQMNWIDKRLSWN 288
+ + E + Q +W DKRLS++
Sbjct: 72 IDMVSEVNMDYTLTMYFQQSWKDKRLSYS 100
>BC022449-1|AAH22449.1| 474|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, beta 1 protein.
Length = 474
Score = 30.3 bits (65), Expect = 9.2
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Frame = +1
Query: 34 LILFCYXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRH 204
L+ F + C S E N + + +D LL YD PD + V + + +
Sbjct: 12 LLSFPVMITMVCCAHSTNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVAS 71
Query: 205 AN-IRESESTVRILADLQMNWIDKRLSWN 288
+ + E + Q +W DKRLS++
Sbjct: 72 IDMVSEVNMDYTLTMYFQQSWKDKRLSYS 100
>BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein.
Length = 269
Score = 30.3 bits (65), Expect = 9.2
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Frame = +1
Query: 49 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NI 213
+ LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 214 RESESTVRILADLQMNWIDKRLSWNAGEWG 303
E V L+ W+D L WN ++G
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein.
Length = 457
Score = 30.3 bits (65), Expect = 9.2
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Frame = +1
Query: 49 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NI 213
+ LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 4 WPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINV 63
Query: 214 RESESTVRILADLQMNWIDKRLSWNAGEWG 303
E V L+ W+D L WN ++G
Sbjct: 64 DEVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,168,822
Number of Sequences: 237096
Number of extensions: 1865239
Number of successful extensions: 7917
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7896
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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