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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_M21
         (890 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    50   3e-08
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    46   6e-07
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    45   8e-07
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    44   2e-06
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    43   3e-06
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    43   4e-06
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    42   6e-06
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    42   6e-06
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    42   8e-06
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    42   8e-06
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    42   8e-06
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    42   8e-06
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    42   8e-06
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    42   8e-06
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    42   8e-06
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    42   8e-06
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    39   5e-05
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    39   7e-05
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    38   9e-05
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    32   0.006
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    31   0.014
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    30   0.033
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   8.6  

>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 50.0 bits (114), Expect = 3e-08
 Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
 Frame = +1

Query: 76  IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 234
           I SA  C        + D LL+ Y+R   P S     +VV L L L      N+++   T
Sbjct: 9   ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68

Query: 235 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 372
             +   L+  W D +  W+  E+G  T L V SE +W PD+VL N A
Sbjct: 69  TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNA 113



 Score = 22.2 bits (45), Expect = 6.5
 Identities = 17/58 (29%), Positives = 23/58 (39%)
 Frame = -2

Query: 505 WXGPNFXNRX*KXGVXNVQAALFQGDGAVXKIHGRGERSPRRWLQPRLAVPRQASTSV 332
           W    F  R  K  +  V   L   D A  K+HGRG    +      +A   Q+S+ V
Sbjct: 335 WVRKIFIRRLPKLLLMRVPDDLLN-DLAAHKMHGRGRSGKKSKFNAAVAAAVQSSSIV 391


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 45.6 bits (103), Expect = 6e-07
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
 Frame = +1

Query: 67  TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRES 225
           +C +A        +    + D LL+ Y+R   P      ++ V + L L      N++  
Sbjct: 6   SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65

Query: 226 ESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 372
             T  +   ++  W D +L WN  ++G   T  V SE +W PD+VL N A
Sbjct: 66  IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 113


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 45.2 bits (102), Expect = 8e-07
 Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
 Frame = +1

Query: 94  CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 258
           C++ TS S +      L   YDR+  P+ K    ++  L ++H N+ E   TV     L+
Sbjct: 28  CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87

Query: 259 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 360
           + W    L+W + E+   ++  V S  +W PD+V+
Sbjct: 88  LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 44.0 bits (99), Expect = 2e-06
 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
 Frame = +1

Query: 94  CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 252
           C        + D LL+ Y++   P   +   LT+ ++         N++    T  +   
Sbjct: 19  CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76

Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 372
           ++ +W D +L W+  E+G    L V S+ +WRPD+VL N A
Sbjct: 77  VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNA 117


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 43.2 bits (97), Expect = 3e-06
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
 Frame = +1

Query: 121 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 285
           + D LL+ Y+R   P       LT  L L+ + + E     +++     ++  W D +L 
Sbjct: 37  LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96

Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 372
           WN  E+G    L V SE +W PD+VL N A
Sbjct: 97  WNPEEYGGVEMLYVPSENIWLPDIVLYNNA 126


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 42.7 bits (96), Expect = 4e-06
 Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
 Frame = +1

Query: 100 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 267
           N +++S ++D+LL  YD    PD       V + + +R    I E + T  +    + +W
Sbjct: 2   NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61

Query: 268 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 366
           +D+RL++  G+   +  +    R+W+PD    N
Sbjct: 62  VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 42.3 bits (95), Expect = 6e-06
 Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
 Frame = +1

Query: 121 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 285
           +++ LL++Y+    P       + V   + L+   ++ E    +   A L++ W+D  L 
Sbjct: 58  LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117

Query: 286 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA 372
           WN  E+ G     ++  +LW+PD+++ N+A
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSA 147


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 42.3 bits (95), Expect = 6e-06
 Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
 Frame = +1

Query: 121 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 285
           +++ LL++Y+    P       + V   + L+   ++ E    +   A L++ W+D  L 
Sbjct: 58  LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117

Query: 286 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA 372
           WN  E+ G     ++  +LW+PD+++ N+A
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSA 147


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 41.9 bits (94), Expect = 8e-06
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 372
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++ N+A
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 41.9 bits (94), Expect = 8e-06
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 372
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++ N+A
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 41.9 bits (94), Expect = 8e-06
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 372
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++ N+A
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 41.9 bits (94), Expect = 8e-06
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 372
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++ N+A
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 41.9 bits (94), Expect = 8e-06
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 372
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++ N+A
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 41.9 bits (94), Expect = 8e-06
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 372
           ++ E    +   A L++ W+D  L WN  E+ G     ++  +LW+PD+++ N+A
Sbjct: 25  DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 41.9 bits (94), Expect = 8e-06
 Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
 Frame = +1

Query: 121 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 285
           + D LL+ Y++   P  ++  V+ + + L+ + + +     +I+     ++ +W D +L 
Sbjct: 32  LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91

Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 372
           W   E+G    L V S+ +WRPD+VL N A
Sbjct: 92  WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 41.9 bits (94), Expect = 8e-06
 Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
 Frame = +1

Query: 121 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 285
           + D LL+ Y++   P  ++  V+ + + L+ + + +     +I+     ++ +W D +L 
Sbjct: 32  LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91

Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 372
           W   E+G    L V S+ +WRPD+VL N A
Sbjct: 92  WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 39.1 bits (87), Expect = 5e-05
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +1

Query: 175 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 351
           +V  L+LH    ++ E    +     +   W D  L WNA E+ G     V   R+WRPD
Sbjct: 33  VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91

Query: 352 VVLLNAA 372
            +L N A
Sbjct: 92  TILYNNA 98


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 38.7 bits (86), Expect = 7e-05
 Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
 Frame = +1

Query: 73  AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 237
           A+A++      +    +++ LL TY+  E P  ++   +V++  L L    ++ E    +
Sbjct: 11  ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70

Query: 238 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 372
                L++ W D  + WN  ++G    L +   RLW+PDV++ N+A
Sbjct: 71  ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSA 116


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 38.3 bits (85), Expect = 9e-05
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = +1

Query: 172 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 345
           K+ VN  L  ++  N+ E    ++    L+  W D +L W+  ++G      +  +++W+
Sbjct: 51  KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110

Query: 346 PDVVLLNAA 372
           PD+VL N A
Sbjct: 111 PDIVLFNNA 119


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 32.3 bits (70), Expect = 0.006
 Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
 Frame = +1

Query: 109 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 273
           ++++++++LL  Y+    P     +  VV   + +R    + E +    +    + +W D
Sbjct: 36  NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95

Query: 274 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 366
            RLS+       S  +   ER+WRPD    N
Sbjct: 96  SRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 31.1 bits (67), Expect = 0.014
 Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
 Frame = +1

Query: 100 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 267
           N  ++S ++DS   +YD+   P+     + V +T++ L  +++ E +    +    +  W
Sbjct: 8   NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67

Query: 268 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLN 366
            D RL++     G  T  V SE    +W PD   +N
Sbjct: 68  TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVN 102


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 29.9 bits (64), Expect = 0.033
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
 Frame = +1

Query: 100 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 267
           N  ++S ++DS   +YD+   P+     + V +T++ L  +++ E      +    +  W
Sbjct: 8   NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67

Query: 268 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLN 366
            D RL++     G  T  V SE    +W PD   +N
Sbjct: 68  TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVN 102


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = -3

Query: 423 PLXRYTGAESVVPGGGCSRV*QYHVRPPQAFRGHQPSAA 307
           PL   +  ES   G   S    +HV PP    GH  S+A
Sbjct: 489 PLGSVSSTESTCSGEVASLTEYHHVAPPS---GHHASSA 524


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 318 PSAAAPFPCVPTQS 277
           PSA AP P +P  S
Sbjct: 411 PSAGAPMPPIPNMS 424


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.132    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,987
Number of Sequences: 438
Number of extensions: 3522
Number of successful extensions: 54
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)

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