Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_M11
(837 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 51 2e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 46 6e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 45 8e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 45 1e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 45 1e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 44 1e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 43 4e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 41 2e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 38 1e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 34 0.002
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 2.6
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.5
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 6.1
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 6.1
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 50.8 bits (116), Expect = 2e-08
Identities = 41/129 (31%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Frame = +2
Query: 65 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 223
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 224 VRIQADLQMNWIDRRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-HAR 397
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 398 VSNNGSVSW 424
+ G V W
Sbjct: 127 LHYTGKVLW 135
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 484 DMQTCTFKFGS 516
D QTC KFGS
Sbjct: 155 DQQTCFMKFGS 165
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.0 bits (109), Expect = 1e-07
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDRRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 374 GDYALHARVSNNGS 415
G Y + V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.0 bits (109), Expect = 1e-07
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDRRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 374 GDYALHARVSNNGS 415
G Y + V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 47.6 bits (108), Expect = 1e-07
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +2
Query: 83 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 247
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 248 MNWIDRRLSWNAGEW-GCSTWLVSSERLWRPDVVL 349
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDRRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALHARVSNNGS 415
G Y V++NGS
Sbjct: 85 GTYQTSVVVTHNGS 98
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 46.0 bits (104), Expect = 4e-07
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 9/123 (7%)
Frame = +2
Query: 83 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 241
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 242 LQMNWIDRRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALHARVSNNGS 415
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 416 VSW 424
V W
Sbjct: 137 VEW 139
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 484 DMQTCTFKFGS 516
D QTC KFGS
Sbjct: 159 DEQTCVMKFGS 169
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 46.0 bits (104), Expect = 4e-07
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Frame = +2
Query: 53 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 211
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 212 SESTVRIQADLQMNWIDRRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 361
T + ++ W D +L WN ++G T V SE +W PD+VL N A
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 113
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 45.6 bits (103), Expect = 6e-07
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +2
Query: 89 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 256
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 257 IDRRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 355
+DRRL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 24.2 bits (50), Expect = 1.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 430 SAWTLALQFSMQLDNWXNDMQTCTFKFGS 516
S T+ M L+N+ D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDRRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALHARVSNNGS 415
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDRRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALHARVSNNGS 415
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDRRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALHARVSNNGS 415
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDRRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALHARVSNNGS 415
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 200 NIRESESTVRIQADLQMNWIDRRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 373
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 374 GDYALHARVSNNGS 415
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +2
Query: 164 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDRRLSWNAGEW-GCSTWLVSSERLWRPD 340
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 341 VVLLNAAATTAGDYALHAR--VSNNGSVSW 424
+L N A ++ VS+ G V W
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVW 121
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 44.8 bits (101), Expect = 1e-06
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Frame = +2
Query: 110 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDRR 268
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 269 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----HARVSNNGSVSW 424
L WN E+G L V SE +W PD+VL N A G+Y + A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 44.4 bits (100), Expect = 1e-06
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Frame = +2
Query: 41 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NI 205
+ + A+A++ + +++ LL TY+ P +V++ L L ++
Sbjct: 4 WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63
Query: 206 RESESTVRIQADLQMNWIDRRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGD 379
E + L++ W D + WN ++G L + RLW+PDV++ N+A G
Sbjct: 64 DEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGT 123
Query: 380 YALHARVSNNGS 415
Y + V NNG+
Sbjct: 124 YPTNVVVKNNGT 135
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 43.6 bits (98), Expect = 2e-06
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Frame = +2
Query: 110 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDRRLS 274
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 275 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALHARVSNNGSVSW 424
W E+G L V S+ +WRPD+VL NA A A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 484 DMQTCTFKFGS 516
D QTC KFGS
Sbjct: 163 DEQTCVLKFGS 173
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 42.7 bits (96), Expect = 4e-06
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +2
Query: 161 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDRRLSWNAGEW-GCSTWLVSSERLWR 334
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 335 PDVVLL-NAAATTAGDYALHARVSNNGSVSW 424
PD+VL NA Y + + NG V W
Sbjct: 111 PDIVLFNNADGNYEVRYKSNVLIYPNGDVLW 141
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 484 DMQTCTFKFGSRMPNSDXMDFVI 552
D QTC KFGS N D + +
Sbjct: 161 DQQTCIMKFGSWTFNGDQVSLAL 183
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 40.7 bits (91), Expect = 2e-05
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +2
Query: 110 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDRRLS 274
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 275 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 361
W E+G L V S+ +WRPD+VL N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 457 SMQLDNWXNDMQTCTFKFGS 516
S+ ++ + D+QTC K GS
Sbjct: 154 SIDVEFFPYDVQTCVLKLGS 173
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 37.9 bits (84), Expect = 1e-04
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Frame = +2
Query: 86 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 253
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 254 WIDRRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALHARVSNNGSVS 421
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 422 WNKALGH 442
++ H
Sbjct: 159 CVPSVKH 165
Score = 25.8 bits (54), Expect = 0.50
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +1
Query: 472 NWXNDMQTCTFKFGSRMPNSDXMDFVIDKXIFSM 573
+W D C FGS + + + ++ +DK F M
Sbjct: 175 SWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 33.9 bits (74), Expect = 0.002
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +2
Query: 98 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 262
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 263 RRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 355
RLS+ S + ER+WRPD N
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.4 bits (48), Expect = 2.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 307 PSAAAPLPCVPTQSSV 260
PSA AP+P +P S++
Sbjct: 411 PSAGAPMPPIPNMSNM 426
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 2.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 359 AATTAGDYALHARVSNNGSVS 421
AAT AG H R +N+GS S
Sbjct: 528 AATLAGGLCPHRRRANSGSTS 548
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -3
Query: 106 GQ*CCVFAFCRTSYSTSEEKXVTRII 29
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.2 bits (45), Expect = 6.1
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +2
Query: 164 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDRRLS-----WNAGEWGCSTWLVSSER 325
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 326 LWRPDVVLLNA 358
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 22.2 bits (45), Expect = 6.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 573 HTENXFVNHEIHXVTIGHPRTELER 499
H +N V+H H +GH ER
Sbjct: 275 HLDNHHVHHANHHAILGHSGFLCER 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,293
Number of Sequences: 438
Number of extensions: 4618
Number of successful extensions: 76
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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