Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_M10
         (839 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    51   5e-06
CR457187-1|CAG33468.1|  240|Homo sapiens MS4A7 protein.                30   9.1  
BC020673-1|AAH20673.1|  240|Homo sapiens membrane-spanning 4-dom...    30   9.1  
AK075106-1|BAC11405.1|  240|Homo sapiens protein ( Homo sapiens ...    30   9.1  
AF350501-1|AAL56221.1|  240|Homo sapiens four-span transmembrane...    30   9.1  
AF309653-1|AAG30930.1|  240|Homo sapiens CD20/Fc-epsilon-RI-beta...    30   9.1  
AF237916-1|AAK37599.1|  240|Homo sapiens MS4A7 protein protein.        30   9.1  
AF201951-1|AAF17243.1|  240|Homo sapiens high affinity immunoglo...    30   9.1  
AB026043-1|BAB18755.1|  240|Homo sapiens MS4A7 protein.                30   9.1  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 51.2 bits (117), Expect = 5e-06
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = -3

Query: 639 MIGRADIEGSKSNVAMNAWLPQASY 565
           MIGRADIEGSKS+VAMNAW PQASY
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASY 25


>CR457187-1|CAG33468.1|  240|Homo sapiens MS4A7 protein.
          Length = 240

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 720 PVSRRFNPSSRSLLMXDNPTLGEXCFAMIGRADIEGSKSN 601
           P    FNP+  + LM   P LG  CF + G   I   K +
Sbjct: 70  PYPSHFNPAISTTLMSGYPFLGALCFGITGSLSIISGKQS 109


>BC020673-1|AAH20673.1|  240|Homo sapiens membrane-spanning
           4-domains, subfamily A, member 7 protein.
          Length = 240

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 720 PVSRRFNPSSRSLLMXDNPTLGEXCFAMIGRADIEGSKSN 601
           P    FNP+  + LM   P LG  CF + G   I   K +
Sbjct: 70  PYPSHFNPAISTTLMSGYPFLGALCFGITGSLSIISGKQS 109


>AK075106-1|BAC11405.1|  240|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90625 fis, clone PLACE1002967, highly similar to
           Membrane-spanning 4-domains subfamily A member7. ).
          Length = 240

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 720 PVSRRFNPSSRSLLMXDNPTLGEXCFAMIGRADIEGSKSN 601
           P    FNP+  + LM   P LG  CF + G   I   K +
Sbjct: 70  PYPSHFNPAISTTLMSGYPFLGALCFGITGSLSIISGKQS 109


>AF350501-1|AAL56221.1|  240|Homo sapiens four-span transmembrane
           protein 2 protein.
          Length = 240

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 720 PVSRRFNPSSRSLLMXDNPTLGEXCFAMIGRADIEGSKSN 601
           P    FNP+  + LM   P LG  CF + G   I   K +
Sbjct: 70  PYPSHFNPAISTTLMSGYPFLGALCFGITGSLSIISGKQS 109


>AF309653-1|AAG30930.1|  240|Homo sapiens CD20/Fc-epsilon-RI-beta
           family member 4 protein.
          Length = 240

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 720 PVSRRFNPSSRSLLMXDNPTLGEXCFAMIGRADIEGSKSN 601
           P    FNP+  + LM   P LG  CF + G   I   K +
Sbjct: 70  PYPSHFNPAISTTLMSGYPFLGALCFGITGSLSIISGKQS 109


>AF237916-1|AAK37599.1|  240|Homo sapiens MS4A7 protein protein.
          Length = 240

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 720 PVSRRFNPSSRSLLMXDNPTLGEXCFAMIGRADIEGSKSN 601
           P    FNP+  + LM   P LG  CF + G   I   K +
Sbjct: 70  PYPSHFNPAISTTLMSGYPFLGALCFGITGSLSIISGKQS 109


>AF201951-1|AAF17243.1|  240|Homo sapiens high affinity
           immunoglobulin epsilon receptor beta subunit protein.
          Length = 240

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 720 PVSRRFNPSSRSLLMXDNPTLGEXCFAMIGRADIEGSKSN 601
           P    FNP+  + LM   P LG  CF + G   I   K +
Sbjct: 70  PYPSHFNPAISTTLMSGYPFLGALCFGITGSLSIISGKQS 109


>AB026043-1|BAB18755.1|  240|Homo sapiens MS4A7 protein.
          Length = 240

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 720 PVSRRFNPSSRSLLMXDNPTLGEXCFAMIGRADIEGSKSN 601
           P    FNP+  + LM   P LG  CF + G   I   K +
Sbjct: 70  PYPSHFNPAISTTLMSGYPFLGALCFGITGSLSIISGKQS 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,969,849
Number of Sequences: 237096
Number of extensions: 2247325
Number of successful extensions: 3677
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3677
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)