Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_M08
         (848 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X55019-1|CAA38759.1|  517|Homo sapiens acetylcholine receptor de...    30   9.2  
X01715-1|CAA25861.1|  520|Homo sapiens acetylcholine receptor ga...    30   9.2  
M86383-1|AAC84176.1|  502|Homo sapiens nicotinic acetylcholine r...    30   9.2  
BC111802-1|AAI11803.1|  465|Homo sapiens CHRNG protein protein.        30   9.2  
BC093925-1|AAH93925.1|  517|Homo sapiens cholinergic receptor, n...    30   9.2  
BC093923-1|AAH93923.1|  517|Homo sapiens cholinergic receptor, n...    30   9.2  
AC092165-3|AAY24103.1|  520|Homo sapiens unknown protein.              30   9.2  
AC092165-2|AAY24102.1|  517|Homo sapiens unknown protein.              30   9.2  

>X55019-1|CAA38759.1|  517|Homo sapiens acetylcholine receptor delta
           subunit protein.
          Length = 517

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 151 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 291
           +  + V L L L +  +++E E T+     ++  W D RL WNA   G
Sbjct: 49  EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96


>X01715-1|CAA25861.1|  520|Homo sapiens acetylcholine receptor gamma
           chain precursor protein.
          Length = 520

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
 Frame = +1

Query: 106 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLS 270
           ++  L+  YD +  P  +   VVN++L L   N+    E E  +     ++M W D RL 
Sbjct: 32  LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91

Query: 271 WN 276
           W+
Sbjct: 92  WD 93


>M86383-1|AAC84176.1|  502|Homo sapiens nicotinic acetylcholine
           receptor alpha 3 subunit precursor protein.
          Length = 502

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 375 TTLSAPVYLITAPVSWIKRLDXXTPISMXLDXWPXDMQTCTFQFGS 512
           TT +  +   T  V+WI      +   + +  +P D Q CT +FGS
Sbjct: 131 TTKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGS 176


>BC111802-1|AAI11803.1|  465|Homo sapiens CHRNG protein protein.
          Length = 465

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
 Frame = +1

Query: 106 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLS 270
           ++  L+  YD +  P  +   VVN++L L   N+    E E  +     ++M W D RL 
Sbjct: 29  LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 88

Query: 271 WN 276
           W+
Sbjct: 89  WD 90


>BC093925-1|AAH93925.1|  517|Homo sapiens cholinergic receptor,
           nicotinic, delta protein.
          Length = 517

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 151 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 291
           +  + V L L L +  +++E E T+     ++  W D RL WNA   G
Sbjct: 49  EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96


>BC093923-1|AAH93923.1|  517|Homo sapiens cholinergic receptor,
           nicotinic, delta protein.
          Length = 517

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 151 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 291
           +  + V L L L +  +++E E T+     ++  W D RL WNA   G
Sbjct: 49  EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96


>AC092165-3|AAY24103.1|  520|Homo sapiens unknown protein.
          Length = 520

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
 Frame = +1

Query: 106 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLS 270
           ++  L+  YD +  P  +   VVN++L L   N+    E E  +     ++M W D RL 
Sbjct: 32  LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91

Query: 271 WN 276
           W+
Sbjct: 92  WD 93


>AC092165-2|AAY24102.1|  517|Homo sapiens unknown protein.
          Length = 517

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 151 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 291
           +  + V L L L +  +++E E T+     ++  W D RL WNA   G
Sbjct: 49  EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,416,015
Number of Sequences: 237096
Number of extensions: 2000124
Number of successful extensions: 4244
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4244
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)