Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_M08
(848 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 33 0.37
AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic ac... 33 0.37
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 33 0.37
AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-P... 33 0.37
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 33 0.37
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 33 0.37
X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein. 33 0.65
AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA... 33 0.65
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 31 2.6
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 31 2.6
AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-P... 31 2.6
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 31 2.6
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 31 2.6
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 33.5 bits (73), Expect = 0.37
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
+ RLW+PDV++ N+A G YA V NNGS L
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCL 174
>AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 subunit protein.
Length = 219
Score = 33.5 bits (73), Expect = 0.37
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
+ RLW+PDV++ N+A G YA V NNGS L
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCL 174
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 33.5 bits (73), Expect = 0.37
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
+ RLW+PDV++ N+A G YA V NNGS L
Sbjct: 115 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCL 152
>AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-PC,
isoform C protein.
Length = 219
Score = 33.5 bits (73), Expect = 0.37
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
+ RLW+PDV++ N+A G YA V NNGS L
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCL 174
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 33.5 bits (73), Expect = 0.37
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
+ RLW+PDV++ N+A G YA V NNGS L
Sbjct: 137 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCL 174
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 33.5 bits (73), Expect = 0.37
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
+ RLW+PDV++ N+A G YA V NNGS L
Sbjct: 118 IPPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGSCL 155
>X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein.
Length = 686
Score = 32.7 bits (71), Expect = 0.65
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +1
Query: 76 ECENATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQ 243
+ N ++S ++D+LL YD PD + + + +R I E + T + +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161
Query: 244 MNWIDKRLSW 273
+W+DKRL++
Sbjct: 162 QSWVDKRLAF 171
>AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA
protein.
Length = 686
Score = 32.7 bits (71), Expect = 0.65
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +1
Query: 76 ECENATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQ 243
+ N ++S ++D+LL YD PD + + + +R I E + T + +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161
Query: 244 MNWIDKRLSW 273
+W+DKRL++
Sbjct: 162 QSWVDKRLAF 171
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
+ R+W+PDV++ N+A G Y V NNGS L
Sbjct: 389 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCL 426
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
+ R+W+PDV++ N+A G Y V NNGS L
Sbjct: 388 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCL 425
>AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-PA,
isoform A protein.
Length = 570
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
+ R+W+PDV++ N+A G Y V NNGS L
Sbjct: 340 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCL 377
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
+ R+W+PDV++ N+A G Y V NNGS L
Sbjct: 389 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCL 426
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
+ R+W+PDV++ N+A G Y V NNGS L
Sbjct: 389 IPPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGSCL 426
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,569,510
Number of Sequences: 53049
Number of extensions: 601819
Number of successful extensions: 1477
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1477
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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